RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 NENFQ9UMX5 172 aa15.26■□□□□ 0.03
UBXN4-203ENST00000416538 A0A087X0T9 212 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 A0A1W2PQJ5 194 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 EIF3CLB5ME19 914 aaKnown RBP15.25■□□□□ 0.03
UBXN4-203ENST00000416538 K7ESM1 405 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 FPGTO14772 594 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 CASC3O15234 703 aaKnown RBP15.25■□□□□ 0.03
UBXN4-203ENST00000416538 PRPSAP2O60256 369 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 FAM228BP0C875 321 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 MMP12P39900 470 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 SLC25A11Q02978 314 aaKnown RBP15.25■□□□□ 0.03
UBXN4-203ENST00000416538 RALGDSQ12967 914 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 TARDBPQ13148 414 aaKnown RBP eCLIP15.25■□□□□ 0.03
UBXN4-203ENST00000416538 SGCGQ13326 291 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 DPYSL2Q16555 572 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 TMEM52BQ4KMG9 183 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 C19orf48Q6RUI8 117 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 ZSCAN30Q86W11 494 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 CAMK1DQ8IU85 385 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 FAM174AQ8TBP5 190 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 EIF3CQ99613 913 aaKnown RBP15.25■□□□□ 0.03
UBXN4-203ENST00000416538 NLGN3Q9NZ94 848 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 LHX6Q9UPM6 363 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 SCINQ9Y6U3 715 aa15.25■□□□□ 0.03
UBXN4-203ENST00000416538 ZFC3H1O60293 1989 aaKnown RBP15.25■□□□□ 0.03
UBXN4-203ENST00000416538 TTC24A2A3L6 582 aaPredicted RBP15.24■□□□□ 0.03
UBXN4-203ENST00000416538 ARHGAP42A6NI28 874 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 DFFAO00273 331 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 SCAMP1O15126 338 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 TM7SF2O76062 418 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 RNF8O76064 485 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 PEX11BO96011 259 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 CELA2BP08218 269 aaPredicted RBP15.24■□□□□ 0.03
UBXN4-203ENST00000416538 CKMT1AP12532 417 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 C6P13671 934 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 GM2AP17900 193 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 AMPD1P23109 780 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 DAB2P98082 770 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 RAD51Q06609 339 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 ILKQ13418 452 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 UGP2Q16851 508 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 WSCD2Q2TBF2 565 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 DCP2Q8IU60 420 aaKnown RBP15.24■□□□□ 0.03
UBXN4-203ENST00000416538 PSTKQ8IV42 348 aaKnown RBP15.24■□□□□ 0.03
UBXN4-203ENST00000416538 PDCD7Q8N8D1 485 aaKnown RBP15.24■□□□□ 0.03
UBXN4-203ENST00000416538 CXorf40AQ8TE69 158 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 FUBP1Q96AE4 644 aaKnown RBP15.24■□□□□ 0.03
UBXN4-203ENST00000416538 ECHDC3Q96DC8 303 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 CRELD1Q96HD1 420 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 NCAPGQ9BPX3 1015 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 LRRC61Q9BV99 259 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 SUV39H2Q9H5I1 410 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 SP110Q9HB58 689 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.24■□□□□ 0.03
UBXN4-203ENST00000416538 NBEAQ8NFP9 2946 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 SCN8AQ9UQD0 1980 aa15.24■□□□□ 0.03
UBXN4-203ENST00000416538 RIOK3O14730 519 aaKnown RBP15.23■□□□□ 0.03
UBXN4-203ENST00000416538 TLX3O43711 291 aaPredicted RBP15.23■□□□□ 0.03
UBXN4-203ENST00000416538 GCATO75600 419 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 MYBL1P10243 752 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 RARAP10276 462 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 JUPP14923 745 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 JUNDP17535 347 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 PCK1P35558 622 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 HNF1BP35680 557 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 UBASH3AP57075 661 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 HNRNPKP61978 463 aaKnown RBP eCLIP15.23■□□□□ 0.034e-7■■□□□ 13.6
UBXN4-203ENST00000416538 SLC10A7Q0GE19 358 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 COL28A1Q2UY09 1125 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 DEFB133Q30KQ1 61 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 POLNQ7Z5Q5 900 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 SRLQ86TD4 932 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 PHACTR4Q8IZ21 702 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 PGBD5Q8N414 524 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 DCBLD1Q8N8Z6 715 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 CPLX3Q8WVH0 158 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 HSPH1Q92598 858 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 TRIM11Q96F44 468 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 CSPG4P5Q96PW8 444 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 ZWILCHQ9H900 591 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 IFNKQ9P0W0 207 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 IPO11Q9UI26 975 aaKnown RBP15.23■□□□□ 0.03
UBXN4-203ENST00000416538 ATP8A1Q9Y2Q0 1164 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 PCDHB1Q9Y5F3 818 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 IGSF10Q6WRI0 2623 aa15.23■□□□□ 0.03
UBXN4-203ENST00000416538 TRAFD1O14545 582 aaPredicted RBP15.22■□□□□ 0.03
UBXN4-203ENST00000416538 AQP9O43315 295 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 PALMO75781 387 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 CYP1A2P05177 515 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 DESP17661 470 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 CSNK1DP48730 415 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 HCAR3P49019 387 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 ZBED6P86452 979 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 IL10RBQ08334 325 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 C1orf61Q13536 156 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 ZSCAN23Q3MJ62 389 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 CDCP2Q5VXM1 449 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 GUSBP11Q6P575 273 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 MACC1Q6ZN28 852 aa15.22■□□□□ 0.03
UBXN4-203ENST00000416538 PELI3Q8N2H9 469 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms