RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 TTYH3Q9C0H2 523 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 GMIPQ9P107 970 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 ENTPD5O75356 428 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 SLC44A4Q53GD3 710 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 NET1Q7Z628 596 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-204ENST00000400337 CHKBQ9Y259 395 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-204ENST00000400337 RXRGP48443 463 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 CDH13P55290 713 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 USP4Q13107 963 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 MTMR14Q8NCE2 650 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 LINGO1Q96FE5 620 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 PPP3R2Q96LZ3 170 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 QRFPRQ96P65 431 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 AGO3Q9H9G7 860 aaKnown RBP18.29■□□□□ 0.52
COL18A1-204ENST00000400337 PNPOQ9NVS9 261 aa18.29■□□□□ 0.52
COL18A1-204ENST00000400337 LEF1Q9UJU2 399 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-204ENST00000400337 MED1Q15648 1581 aaPredicted RBP18.29■□□□□ 0.52
COL18A1-204ENST00000400337 GLTPD2A6NH11 291 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 EDF1O60869 148 aaKnown RBP18.28■□□□□ 0.52
COL18A1-204ENST00000400337 SERPINA6P08185 405 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 SLC24A5Q71RS6 500 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 LENG1Q96BZ8 264 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-204ENST00000400337 BTN2A3PQ96KV6 586 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 DCUN1D5Q9BTE7 237 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 RAD21L1Q9H4I0 556 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 COPG2Q9UBF2 871 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 ZNHIT2Q9UHR6 403 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 TSC22D4Q9Y3Q8 395 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 CLCNKBP51801 687 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 HK2P52789 917 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 PRKAG1P54619 331 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 ATP6V0D1P61421 351 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 ABRQ12979 859 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 METTL3Q86U44 580 aaKnown RBP18.28■□□□□ 0.52
COL18A1-204ENST00000400337 MAB21L3Q8N8X9 362 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 C1orf50Q9BV19 199 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 RHBGQ9H310 441 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 RHOJQ9H4E5 214 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 REEP1Q9H902 201 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 SPAG4Q9NPE6 437 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 XPNPEP1Q9NQW7 623 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 MAGEC1O60732 1142 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 RECQL5O94762 991 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-204ENST00000400337 CES5AQ6NT32 575 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 CLVS1Q8IUQ0 354 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-204ENST00000400337 TFAP2BQ92481 460 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 RORBQ92753 470 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 TRAPPC9Q96Q05 1148 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 OSBPL10Q9BXB5 764 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 DPEP3Q9H4B8 488 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 PLK2Q9NYY3 685 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 RCOR3Q9P2K3 495 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-204ENST00000400337 NR2E3Q9Y5X4 410 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 FAM155BO75949 473 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 ASGR1P07306 291 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 CD48P09326 243 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 SMPD1P17405 629 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 PPM1AP35813 382 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 SLC5A3P53794 718 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 CEP78Q5JTW2 689 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 VSTM1Q6UX27 236 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 SVOPQ8N4V2 548 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 CPT1BQ92523 772 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 PHACTR1Q9C0D0 580 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 HIPK3Q9H422 1215 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 TMEM216Q9P0N5 145 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 AP3M1Q9Y2T2 418 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 TPRKBQ9Y3C4 175 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 AZIN1O14977 448 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 CXCL14O95715 111 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 LINC00032P0C843 101 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 RP9Q8TA86 221 aaKnown RBP18.28■□□□□ 0.52
COL18A1-204ENST00000400337 MAGEE2Q8TD90 523 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-204ENST00000400337 MAML3Q96JK9 1138 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 ATAD3AQ9NVI7 634 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 GGA2Q9UJY4 613 aa18.28■□□□□ 0.52
COL18A1-204ENST00000400337 NFAT5O94916 1531 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 C1QTNF3-AMACRE9PGA6 284 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 NDUFB5O43674 189 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 SGTAO43765 313 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 BCL10O95999 233 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 CNPP09543 421 aaKnown RBP18.27■□□□□ 0.52
COL18A1-204ENST00000400337 POLD2P49005 469 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 CPSF6Q16630 551 aaKnown RBP eCLIP18.27■□□□□ 0.52
COL18A1-204ENST00000400337 FNBP1LQ5T0N5 605 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 LYPLAL1Q5VWZ2 237 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 GCNT7Q6ZNI0 430 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 SLC26A9Q7LBE3 791 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 SLC44A1Q8WWI5 657 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 UBE2E3Q969T4 207 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 APOBEC3GQ9HC16 384 aaKnown RBP18.27■□□□□ 0.52
COL18A1-204ENST00000400337 ENOPH1Q9UHY7 261 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 ADAMTS3O15072 1205 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 OTCP00480 354 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 CES1P23141 567 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 PSMA3P25788 255 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 KCNA10Q16322 511 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 PPP1R15BQ5SWA1 713 aa18.27■□□□□ 0.52
COL18A1-204ENST00000400337 TTC27Q6P3X3 843 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms