RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 PLPPR4Q7Z2D5 763 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 DDHD1Q8NEL9 900 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 SHCBP1Q8NEM2 672 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 USP33Q8TEY7 942 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 C18orf25Q96B23 403 aaPredicted RBP14.09□□□□□ -0.15
APOB-202ENST00000399256 FBXL8Q96CD0 374 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 R3HDMLQ9H3Y0 253 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 LRRC4Q9HBW1 653 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 FBRSL1Q9HCM7 1045 aaKnown RBP14.09□□□□□ -0.15
APOB-202ENST00000399256 K7EPI3 171 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 FUCA1P04066 466 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 HSPA8P11142 646 aaKnown RBP14.09□□□□□ -0.15
APOB-202ENST00000399256 TSPAN8P19075 237 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 KCNA5P22460 613 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 YAP1P46937 504 aaKnown RBP14.09□□□□□ -0.15
APOB-202ENST00000399256 NEDD8Q15843 81 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 ZNF829Q3KNS6 432 aaPredicted RBP14.09□□□□□ -0.15
APOB-202ENST00000399256 SYPL2Q5VXT5 272 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 NANOGP8Q6NSW7 305 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 RWDD4Q6NW29 188 aaKnown RBP14.09□□□□□ -0.15
APOB-202ENST00000399256 PIWIL4Q7Z3Z4 852 aaKnown RBP14.09□□□□□ -0.15
APOB-202ENST00000399256 CAMK1DQ8IU85 385 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 CENPSQ8N2Z9 138 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 RSPH1Q8WYR4 309 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 ZMAT2Q96NC0 199 aaKnown RBP14.09□□□□□ -0.15
APOB-202ENST00000399256 CHST12Q9NRB3 414 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 PIGVQ9NUD9 493 aa14.09□□□□□ -0.15
APOB-202ENST00000399256 ZNF701M0R085 212 aaPredicted RBP14.08□□□□□ -0.15
APOB-202ENST00000399256 SERPINB7O75635 380 aa14.08□□□□□ -0.15
APOB-202ENST00000399256 C22orf31O95567 290 aa14.08□□□□□ -0.15
APOB-202ENST00000399256 TGFB3P10600 412 aa14.08□□□□□ -0.15
APOB-202ENST00000399256 CSHL1Q14406 222 aa14.08□□□□□ -0.15
APOB-202ENST00000399256 POU6F1Q14863 301 aa14.08□□□□□ -0.15
APOB-202ENST00000399256 CELF3Q5SZQ8 465 aaKnown RBP14.08□□□□□ -0.15
APOB-202ENST00000399256 ZNF618Q5T7W0 954 aa14.08□□□□□ -0.15
APOB-202ENST00000399256 CLEC6AQ6EIG7 209 aa14.08□□□□□ -0.15
APOB-202ENST00000399256 CUZD1Q86UP6 607 aa14.08□□□□□ -0.15
APOB-202ENST00000399256 SLC25A23Q9BV35 468 aa14.08□□□□□ -0.15
APOB-202ENST00000399256 SOX17Q9H6I2 414 aaPredicted RBP14.08□□□□□ -0.15
APOB-202ENST00000399256 ARMC1Q9NVT9 282 aa14.08□□□□□ -0.15
APOB-202ENST00000399256 ZNF112Q9UJU3 913 aa14.08□□□□□ -0.15
APOB-202ENST00000399256 BPTFQ12830 3046 aa14.08□□□□□ -0.15
APOB-202ENST00000399256 PGK2P07205 417 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 NDUFV1P49821 464 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 TAS2R39P59534 338 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 PHEXP78562 749 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 PPIL2Q13356 520 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 IL31Q6EBC2 164 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 OTOP3Q7RTS5 596 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 MFSD2AQ8NA29 543 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 TANC1Q9C0D5 1861 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 MEAF6Q9HAF1 191 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 PTBP2Q9UKA9 531 aaKnown RBP14.08□□□□□ -0.16
APOB-202ENST00000399256 OAZ3Q9UMX2 235 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 ZNF232Q9UNY5 417 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 C19orf81C9J6K1 198 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 C9JVG2 144 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 CLOCKO15516 846 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 JCHAINP01591 159 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 ATP5F1P24539 256 aaPredicted RBP14.08□□□□□ -0.16
APOB-202ENST00000399256 TPI1P60174 286 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 CDH17Q12864 832 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 PDCD4Q53EL6 469 aaKnown RBP14.08□□□□□ -0.16
APOB-202ENST00000399256 FAM45BPQ6NSW5 357 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 KCTD8Q6ZWB6 473 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 PIGZQ86VD9 579 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 FAM45AQ8TCE6 357 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 TANKQ92844 425 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 PHF21BQ96EK2 531 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 TRIM8Q9BZR9 551 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 CDHR5Q9HBB8 845 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 NSMCE4AQ9NXX6 385 aa14.08□□□□□ -0.16
APOB-202ENST00000399256 DHRS12A0PJE2 317 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 TRIM43BA6NCK2 446 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 GLTPD2A6NH11 291 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 HBP1O60381 514 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 DCKP27707 260 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 TKTP29401 623 aaKnown RBP14.07□□□□□ -0.16
APOB-202ENST00000399256 NOS2P35228 1153 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 SOX11P35716 441 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 GSTM4Q03013 218 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 LAMC2Q13753 1193 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 FAM187BQ17R55 369 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 SLC36A3Q495N2 470 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 HFE2Q6ZVN8 426 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 RETREG3Q86VR2 466 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 ZNF513Q8N8E2 541 aaPredicted RBP14.07□□□□□ -0.16
APOB-202ENST00000399256 ADAMTS16Q8TE57 1224 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 MRPL57Q9BQC6 102 aaKnown RBP14.07□□□□□ -0.16
APOB-202ENST00000399256 CCM2LQ9NUG4 571 aaPredicted RBP14.07□□□□□ -0.16
APOB-202ENST00000399256 SNX10Q9Y5X0 201 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 NR5A2O00482 541 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 NME4O00746 187 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 ZNF182P17025 639 aaPredicted RBP14.07□□□□□ -0.16
APOB-202ENST00000399256 OXTRP30559 389 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 SCNN1AP37088 669 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 ACADSBP45954 432 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 RXRGP48443 463 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 BCAP31P51572 246 aa14.07□□□□□ -0.16
APOB-202ENST00000399256 RABGGTBP53611 331 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms