RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 ACMSDQ8TDX5 336 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 CNDP1Q96KN2 507 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 DPEP3Q9H4B8 488 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 TCF7L2Q9NQB0 619 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 RAB6BQ9NRW1 208 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 FAM49BQ9NUQ9 324 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 TMEM9Q9P0T7 183 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 SNX13Q9Y5W8 968 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 TTC3P53804 2025 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 TRIM64A6NGJ6 449 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 APOC4-APOC2K7ER74 178 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 TRIM38O00635 465 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 CAPN15O75808 1086 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 APOC2P02655 101 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 PRKCGP05129 697 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 ACRP10323 421 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 CD19P15391 556 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 CNTFP26441 200 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 ZBTB49Q6ZSB9 765 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 VASH1Q7L8A9 365 aaPredicted RBP10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 PTAR1Q7Z6K3 402 aaPredicted RBP10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 CTU1Q7Z7A3 348 aaKnown RBP10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 ZNF280BQ86YH2 543 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 SPATA18Q8TC71 538 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 CLIP3Q96DZ5 547 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 MRPL45Q9BRJ2 306 aaKnown RBP10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 POLR1BQ9H9Y6 1135 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 DCDC2Q9UHG0 476 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 POU2F3Q9UKI9 436 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 PCDHB12Q9Y5F1 795 aa10.23□□□□□ -0.77
HMGCLL1-205ENST00000398661 USP34Q70CQ2 3546 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 GOLGA8QA0A0J9YX86 632 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 GOLGA8OA6NCC3 632 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 GOLGA8NF8WBI6 632 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 TPP1O14773 563 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 GCATO75600 419 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 VAPBO95292 243 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 HSPA4LO95757 839 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 KRT7P08729 469 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 CCNA2P20248 432 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 MYF6P23409 242 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 MAP4P27816 1152 aaKnown RBP10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 IL1R2P27930 398 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 GNL1P36915 607 aaPredicted RBP10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 HNRNPFP52597 415 aaKnown RBP10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 SLC25A11Q02978 314 aaKnown RBP10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 HMBOX1Q6NT76 420 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 CYP2U1Q7Z449 544 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 IMPG2Q9BZV3 1241 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 COPG2Q9UBF2 871 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 OGDHLQ9ULD0 1010 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 ANKRD34BA5PLL1 514 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 BCL10O95999 233 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 ALDOAP04075 364 aaKnown RBP10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 GNAO1P09471 354 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 RFC1P35251 1148 aaPredicted RBP10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 NKX3-2P78367 333 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 RHDQ02161 417 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 TAP1Q03518 808 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 GRSF1Q12849 480 aaKnown RBP eCLIP10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 RFTN1Q14699 578 aaPredicted RBP10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 AGAP7PQ5VUJ5 663 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 PPP4R4Q6NUP7 873 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 NPNTQ6UXI9 565 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 ALKAL1Q6UXT8 129 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 SLC39A5Q6ZMH5 540 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 LRRC8DQ7L1W4 858 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 HERC6Q8IVU3 1022 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 TMCO5AQ8N6Q1 288 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 SLCO4A1Q96BD0 722 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 ASB9Q96DX5 294 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 NOL11Q9H8H0 719 aaKnown RBP10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 EFCAB1Q9HAE3 211 aa10.22□□□□□ -0.77
HMGCLL1-205ENST00000398661 PRRC2BQ5JSZ5 2229 aaKnown RBP10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 C9IYK1 514 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 SOCS2O14508 198 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 RSL1D1O76021 490 aaKnown RBP10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 CLPXO76031 633 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 SEC24DO94855 1032 aaPredicted RBP10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 AMHP03971 560 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 CKMT2P17540 419 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 PSMA2P25787 234 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 CCT8P50990 548 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 HADHQ16836 314 aaKnown RBP10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 TIGD2Q4W5G0 525 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 CHSY3Q70JA7 882 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 ACOT1Q86TX2 421 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 KCTD6Q8NC69 237 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 PDPRQ8NCN5 879 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 UBA3Q8TBC4 463 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 LRRC39Q96DD0 335 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 TMA16Q96EY4 203 aaKnown RBP10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 UHRF1Q96T88 793 aaPredicted RBP10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 HERC2P3Q9BVR0 1158 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 OSBPL10Q9BXB5 764 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 WDR55Q9H6Y2 383 aaPredicted RBP10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 NANOGQ9H9S0 305 aa10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 C20orf96Q9NUD7 363 aaPredicted RBP10.21□□□□□ -0.77
HMGCLL1-205ENST00000398661 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms