RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 ZNF217O75362 1048 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SMNDC1O75940 238 aaKnown RBP eCLIP2.74□□□□□ -1.97
CHD9-202ENST00000398510 MAP3K6O95382 1288 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 PRLP01236 227 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ITGAVP06756 1048 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 RARAP10276 462 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CLUP10909 449 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CHRM3P20309 590 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ADORA1P30542 326 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 HOXA10P31260 410 aaPredicted RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 RPA3P35244 121 aaPredicted RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 CAPGP40121 348 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CPA2P48052 419 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 MASP1P48740 699 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CYP4F2P78329 520 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CYP4F3Q08477 520 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SPANXN2Q5MJ10 180 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SYT10Q6XYQ8 523 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ARHGAP22Q7Z5H3 698 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 NPAS4Q8IUM7 802 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 GPIHBP1Q8IV16 184 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CROCCP3Q8IVE0 287 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ANKRD13CQ8N6S4 541 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CPEB3Q8NE35 698 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 TP53INP1Q96A56 240 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 RAB7BQ96AH8 199 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 MED8Q96G25 268 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 TEKT5Q96M29 485 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 TEFMQ96QE5 360 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 APOL5Q9BWW9 433 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ATXN3LQ9H3M9 355 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 PTGES2Q9H7Z7 377 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ABCB6Q9NP58 842 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 BATF3Q9NR55 127 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 RASSF1Q9NS23 344 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CNTN3Q9P232 1028 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 MAP10Q9P2G4 905 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 OPTCQ9UBM4 332 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 PHF11Q9UIL8 331 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SNCAIPQ9Y6H5 919 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 LRP5O75197 1615 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 EDDM13A0A1B0GTR0 161 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 NPIPA7E9PJI5 369 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 NUAK1O60285 661 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ZNF500O60304 480 aaPredicted RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 KHDRBS3O75525 346 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 NPIPA8P0DM63 369 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 MAPK3P27361 379 aaPredicted RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 NMT1P30419 496 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 LIG3P49916 1009 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CSNK2BP67870 215 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 MRPS35P82673 323 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 ACVR2BQ13705 512 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 TOMM20Q15388 145 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 QRICH1Q2TAL8 776 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 AP1ARQ63HQ0 302 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 AFTPHQ6ULP2 937 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 LCTLQ6UWM7 567 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SLC36A4Q6YBV0 504 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 DENND5BQ6ZUT9 1274 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 GLT6D1Q7Z4J2 308 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 RASAL3Q86YV0 1011 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 PARP8Q8N3A8 854 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 TMEM156Q8N614 296 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 TOP6BLQ8N6T0 577 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CELF5Q8N6W0 485 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 EIF1ADQ8N9N8 165 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 C9orf43Q8TAL5 461 aaPredicted RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 GATAD2BQ8WXI9 593 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ERP44Q9BS26 406 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 OSBPL8Q9BZF1 889 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 TRIM9Q9C026 710 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 MAGEE1Q9HCI5 957 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CNGB3Q9NQW8 809 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SH3GLB1Q9Y371 365 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 INSL6Q9Y581 213 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 PDZK1P1A8MUH7 402 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 PDHXO00330 501 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 AREL1O15033 823 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ADAMDEC1O15204 470 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 GPR37L1O60883 481 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 PLGP00747 810 aaPredicted RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 SERPINA1P01009 418 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 CYP1A2P05177 515 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SELPP16109 830 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ITIH1P19827 911 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 MLLT3P42568 568 aaPredicted RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 MECP2P51608 486 aaKnown RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 CACNB1Q02641 598 aaPredicted RBP2.74□□□□□ -1.97
CHD9-202ENST00000398510 SP140Q13342 867 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 HSDL1Q3SXM5 330 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 PKDCCQ504Y2 493 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ATCAYQ86WG3 371 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 SFR1Q86XK3 245 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 REPS2Q8NFH8 660 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 UCN3Q969E3 161 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 FAM83CQ9BQN1 747 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 ISCA1Q9BUE6 129 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 BCO2Q9BYV7 579 aa2.74□□□□□ -1.97
CHD9-202ENST00000398510 TASP1Q9H6P5 420 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms