RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 CABYRO75952 493 aa11.52□□□□□ -0.57
PDCD4-202ENST00000393104 BEST1O76090 585 aa11.52□□□□□ -0.57
PDCD4-202ENST00000393104 CPNE6O95741 557 aa11.52□□□□□ -0.57
PDCD4-202ENST00000393104 ATICP31939 592 aa11.52□□□□□ -0.57
PDCD4-202ENST00000393104 APLP1P51693 650 aa11.52□□□□□ -0.57
PDCD4-202ENST00000393104 ZBTB6Q15916 424 aa11.52□□□□□ -0.57
PDCD4-202ENST00000393104 ZNF829Q3KNS6 432 aaPredicted RBP11.52□□□□□ -0.57
PDCD4-202ENST00000393104 BSPRYQ5W0U4 402 aa11.52□□□□□ -0.57
PDCD4-202ENST00000393104 LIMS2Q7Z4I7 341 aa11.52□□□□□ -0.57
PDCD4-202ENST00000393104 CROCCP3Q8IVE0 287 aa11.52□□□□□ -0.57
PDCD4-202ENST00000393104 CENPSQ8N2Z9 138 aa11.52□□□□□ -0.57
PDCD4-202ENST00000393104 SLC15A4Q8N697 577 aa11.52□□□□□ -0.57
PDCD4-202ENST00000393104 SGF29Q96ES7 293 aa11.52□□□□□ -0.57
PDCD4-202ENST00000393104 HNRNPABQ99729 332 aaKnown RBP11.52□□□□□ -0.57
PDCD4-202ENST00000393104 PTPN18Q99952 460 aa11.52□□□□□ -0.57
PDCD4-202ENST00000393104 BTBD2Q9BX70 525 aa11.52□□□□□ -0.57
PDCD4-202ENST00000393104 FBRSL1Q9HCM7 1045 aaKnown RBP11.52□□□□□ -0.57
PDCD4-202ENST00000393104 CCM2LQ9NUG4 571 aaPredicted RBP11.52□□□□□ -0.57
PDCD4-202ENST00000393104 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.52□□□□□ -0.57
PDCD4-202ENST00000393104 LAMA3Q16787 3333 aa11.52□□□□□ -0.57
PDCD4-202ENST00000393104 GAS2O43903 313 aaKnown RBP11.51□□□□□ -0.57
PDCD4-202ENST00000393104 HNRNPLP14866 589 aaKnown RBP eCLIP11.51□□□□□ -0.57
PDCD4-202ENST00000393104 LMO2P25791 158 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 YWHAQP27348 245 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 AVPR1AP37288 418 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 BNIP3Q12983 259 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 ATP6AP1Q15904 470 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 GLRA4Q5JXX5 417 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 MORN1Q5T089 497 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 INTS11Q5TA45 600 aaKnown RBP11.51□□□□□ -0.57
PDCD4-202ENST00000393104 LRRC8EQ6NSJ5 796 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 LARP4Q71RC2 724 aaKnown RBP eCLIP11.51□□□□□ -0.57
PDCD4-202ENST00000393104 FAM131BQ86XD5 332 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 DENND6AQ8IWF6 608 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 CBR4Q8N4T8 237 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 PDPRQ8NCN5 879 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 NMRK2Q9NPI5 230 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 UPK1AO00322 258 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 TPH1P17752 444 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 UGT1A1P22309 533 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 UGT1A4P22310 534 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 GPX3P22352 226 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 UGT1A3P35503 534 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 UGT1A5P35504 534 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 CLCN3P51790 818 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 GRSF1Q12849 480 aaKnown RBP eCLIP11.51□□□□□ -0.57
PDCD4-202ENST00000393104 PRKAA1Q13131 559 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 ZNF789Q5FWF6 425 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 CELF3Q5SZQ8 465 aaKnown RBP11.51□□□□□ -0.57
PDCD4-202ENST00000393104 SYPL2Q5VXT5 272 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 FAM45BPQ6NSW5 357 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 TMEM207Q6UWW9 146 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 FAM45AQ8TCE6 357 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 CFHR5Q9BXR6 569 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 XPR1Q9UBH6 696 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 VANGL2Q9ULK5 521 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 NEUROG3Q9Y4Z2 214 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 ZNF839A8K0R7 811 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 SPRP35270 261 aaPredicted RBP11.51□□□□□ -0.57
PDCD4-202ENST00000393104 HALP42357 657 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 BCAP31P51572 246 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 HK2P52789 917 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 COG7P83436 770 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 DPY19L1Q2PZI1 675 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 FAM160B1Q5W0V3 765 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 RGMBQ6NW40 437 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 SLC41A1Q8IVJ1 513 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 OR13F1Q8NGS4 319 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 RDH11Q8TC12 318 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 MIPOL1Q8TD10 442 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 CDKL2Q92772 493 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 NAT9Q9BTE0 207 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 TDRD1Q9BXT4 1180 aaKnown RBP11.51□□□□□ -0.57
PDCD4-202ENST00000393104 CXorf21Q9HAI6 301 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 RIC8BQ9NVN3 520 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 CDYLQ9Y232 598 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 COL1A2P08123 1366 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 GBF1Q92538 1859 aa11.51□□□□□ -0.57
PDCD4-202ENST00000393104 A0A1B0GTL3 188 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 J3QRK9 145 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 SPTLC1O15269 473 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 H2AFYO75367 372 aaKnown RBP11.5□□□□□ -0.57
PDCD4-202ENST00000393104 TM4SF4P48230 202 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 ADARB1P78563 741 aaKnown RBP11.5□□□□□ -0.57
PDCD4-202ENST00000393104 MPP1Q00013 466 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 IHHQ14623 411 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 FAM187BQ17R55 369 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 SETD3Q86TU7 594 aaPredicted RBP11.5□□□□□ -0.57
PDCD4-202ENST00000393104 SAPCD2Q86UD0 394 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 KCNMB4Q86W47 210 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 ADGRG5Q8IZF4 528 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 FBXL8Q96CD0 374 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 COX4I2Q96KJ9 171 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 CORO1BQ9BR76 489 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 NT5C1AQ9BXI3 368 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 NFKBIZQ9BYH8 718 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 LTB4R2Q9NPC1 389 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 IARS2Q9NSE4 1012 aaKnown RBP11.5□□□□□ -0.57
PDCD4-202ENST00000393104 PIGVQ9NUD9 493 aa11.5□□□□□ -0.57
PDCD4-202ENST00000393104 RNF19AQ9NV58 838 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms