RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 ARMC12Q5T9G4 340 aa16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 SETD9Q8NE22 299 aa16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 ZMAT2Q96NC0 199 aaKnown RBP16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 MYH13Q9UKX3 1938 aa16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 CD3EAPO15446 510 aaKnown RBP16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 LRIG2O94898 1065 aa16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 CCNCP24863 283 aa16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 BRCC3P46736 316 aa16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 ACTR3P61158 418 aa16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 SLC18A2Q05940 514 aa16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 EPS8Q12929 822 aa16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 PSMD5Q16401 504 aa16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 MON1AQ86VX9 555 aa16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 STARD7Q9NQZ5 370 aa16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 AAASQ9NRG9 546 aa16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 INVSQ9Y283 1065 aa16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 AK5Q9Y6K8 562 aa16.23■□□□□ 0.19
PTPRN2-201ENST00000389413 PIRTP0C851 137 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 IDO1P14902 403 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 HLA-DPA1P20036 260 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 LMO2P25791 158 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 S100A3P33764 101 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 PRKG2Q13237 762 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 ZNF284Q2VY69 593 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 TMEM110Q86TL2 294 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 TMEM132CQ8N3T6 1108 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 SLC25A13Q9UJS0 675 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 KCNH1O95259 989 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 ATXN8OSP0DMR3 200 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 PSMB9P28065 219 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 GLUD2P49448 558 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 CCDC85BQ15834 202 aaPredicted RBP16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 LSM12Q3MHD2 195 aaKnown RBP16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 ABRAXAS1Q6UWZ7 409 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 MPP5Q8N3R9 675 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 OR4L1Q8NH43 312 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 CLEC4CQ8WTT0 213 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 OTULINQ96BN8 352 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 ZFP42Q96MM3 310 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 KLHL5Q96PQ7 755 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 TBCDQ9BTW9 1192 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 PTPRJQ12913 1337 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 SNAP91O60641 907 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 TBX10O75333 385 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 DGKAP23743 735 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 DPYSQ14117 519 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 TTC23Q5W5X9 447 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 MAB21L3Q8N8X9 362 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 RORBQ92753 470 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 SPATA17Q96L03 361 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 PANX3Q96QZ0 392 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 HOPXQ9BPY8 73 aaPredicted RBP16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 SLC7A8Q9UHI5 535 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 POMPQ9Y244 141 aa16.22■□□□□ 0.19
PTPRN2-201ENST00000389413 BBIP1A8MTZ0 92 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 PTGES3LE9PB15 166 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 TK2O00142 265 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 C8orf59Q8N0T1 100 aaPredicted RBP16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 IRGQQ8WZA9 623 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 PKD1L3Q7Z443 1732 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 FAM159BA6NKW6 160 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 H3BMM5 538 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 URODP06132 367 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 CYP2A7P20853 494 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 NDUFV1P49821 464 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 C21orf59P57076 290 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 BCL2L1Q07817 233 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 CCDC92Q53HC0 331 aaPredicted RBP16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 HECTD2Q5U5R9 776 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 TXNDC11Q6PKC3 985 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 GPRIN3Q6ZVF9 776 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 DQX1Q8TE96 717 aaKnown RBP16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 AZIN2Q96A70 460 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 BTBD9Q96Q07 612 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 SPATA16Q9BXB7 569 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 TXLNGYQ9BZA5 131 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 NKX1-2Q9UD57 310 aaPredicted RBP16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 STK39Q9UEW8 545 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 TPRKBQ9Y3C4 175 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 CCDC88AQ3V6T2 1871 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 IFNA14P01570 189 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 LINC00032P0C843 101 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 VAV1P15498 845 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 NMBRP28336 390 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 CDH5P33151 784 aaPredicted RBP16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 GRIA1P42261 906 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 MPP1Q00013 466 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 GRIK3Q13003 919 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 CDCA2Q69YH5 1023 aaPredicted RBP16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 KIAA0408Q6ZU52 694 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 TAS1R3Q7RTX0 852 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 CROCCP3Q8IVE0 287 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 ADHFE1Q8IWW8 467 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 AADATQ8N5Z0 425 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 CDYL2Q8N8U2 506 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 FBXO30Q8TB52 745 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 PLEKHA8Q96JA3 519 aa16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 MLPHQ9BV36 600 aaPredicted RBP16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 CLK4Q9HAZ1 481 aaKnown RBP16.21■□□□□ 0.19
PTPRN2-201ENST00000389413 KLQ9UEF7 1012 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms