RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 STAG1Q8WVM7 1258 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 RND1Q92730 232 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 ZNF566Q969W8 418 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 ARRDC3Q96B67 414 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 ZNF689Q96CS4 500 aaPredicted RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 CDCA5Q96FF9 252 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 ART5Q96L15 291 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 LRR1Q96L50 414 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 ZNF354BQ96LW1 612 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 C17orf77Q96MU5 243 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 TEFMQ96QE5 360 aaKnown RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 IWS1Q96ST2 819 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 TBCBQ99426 244 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 PRPF18Q99633 342 aaKnown RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 GDF15Q99988 308 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 KXD1Q9BQD3 176 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 LRRC1Q9BTT6 524 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 EIF2AQ9BY44 585 aaKnown RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 CLPBQ9H078 707 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 CXorf56Q9H5V9 222 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 CERS4Q9HA82 394 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 PELI2Q9HAT8 420 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 UPF2Q9HAU5 1272 aaKnown RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 NECTIN3Q9NQS3 549 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 INTS10Q9NVR2 710 aaKnown RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 SLC52A1Q9NWF4 448 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 GRHL1Q9NZI5 618 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 NLKQ9UBE8 527 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 UPB1Q9UBR1 384 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 BAG5Q9UL15 447 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 CDC14AQ9UNH5 594 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 RCE1Q9Y256 329 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 MRPS28Q9Y2Q9 187 aaKnown RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 NOP58Q9Y2X3 529 aaKnown RBP0.55□□□□□ -2.32
SNORD28-201ENST00000384706 SMCHD1A6NHR9 2005 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 CROCCQ5TZA2 2017 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 CADPSQ9ULU8 1353 aa0.55□□□□□ -2.32
SNORD28-201ENST00000384706 TYW5A2RUC4 315 aaKnown RBP0.54□□□□□ -2.32
SNORD28-201ENST00000384706 GOLGA6CA6NDK9 693 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 OR6C68A6NDL8 312 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 GOLGA6BA6NDN3 693 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 A8MU10 97 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 PSMD14O00487 310 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 HNRNPDLO14979 420 aaKnown RBP0.54□□□□□ -2.32
SNORD28-201ENST00000384706 NCK2O43639 380 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 PLRG1O43660 514 aaKnown RBP0.54□□□□□ -2.32
SNORD28-201ENST00000384706 CIDEAO60543 219 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 SRSF10O75494 262 aaKnown RBP0.54□□□□□ -2.32
SNORD28-201ENST00000384706 RFPL2O75678 378 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 FGF18O76093 207 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 EGFP01133 1207 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 INHBAP08476 426 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 GOLGA6DP0CG33 693 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 PRSS56P0CW18 603 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 ARSAP15289 507 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 PAX1P15863 534 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 CHN1P15882 459 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 GATA1P15976 413 aaPredicted RBP0.54□□□□□ -2.32
SNORD28-201ENST00000384706 ACADSP16219 412 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 NPPBP16860 134 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 ZNF26P17031 533 aaPredicted RBP0.54□□□□□ -2.32
SNORD28-201ENST00000384706 ITGA2P17301 1181 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 CTPS1P17812 591 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 EEF1GP26641 437 aaKnown RBP0.54□□□□□ -2.32
SNORD28-201ENST00000384706 CDC25CP30307 473 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 AVPR2P30518 371 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 HNRNPH1P31943 449 aaKnown RBP0.54□□□□□ -2.32
SNORD28-201ENST00000384706 TERF1P54274 439 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 SLC8A3P57103 927 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 ISL1P61371 349 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 CHAF1AQ13111 956 aaPredicted RBP0.54□□□□□ -2.32
SNORD28-201ENST00000384706 PEX6Q13608 980 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 PMS2P11Q13670 270 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 GALEQ14376 348 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 GBX1Q14549 363 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 IL13RA2Q14627 380 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 ARHGEF6Q15052 776 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 PPP2R5AQ15172 486 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 RPS6KA2Q15349 733 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 EFNB3Q15768 340 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 CCDC96Q2M329 555 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 SLC35G1Q2M3R5 365 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 AP5B1Q2VPB7 878 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 TBRG1Q3YBR2 411 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 XKR6Q5GH73 641 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 KCNT1Q5JUK3 1230 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 FAM209BQ5JX69 171 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 CCNYL2Q5T2Q4 361 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 STXBP5Q5T5C0 1151 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 ATPAF1Q5TC12 328 aaPredicted RBP0.54□□□□□ -2.32
SNORD28-201ENST00000384706 ARL6IP4Q66PJ3 421 aaKnown RBP0.54□□□□□ -2.32
SNORD28-201ENST00000384706 NXNQ6DKJ4 435 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 ZNF343Q6P1L6 599 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 ZNF790Q6PG37 636 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 GFRALQ6UXV0 394 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 B3GNT6Q6ZMB0 384 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 CCNI2Q6ZMN8 369 aaPredicted RBP0.54□□□□□ -2.32
SNORD28-201ENST00000384706 NOTCH2NLQ7Z3S9 236 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 GALNT7Q86SF2 657 aa0.54□□□□□ -2.32
SNORD28-201ENST00000384706 TMEM219Q86XT9 240 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms