RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 LRPAP1P30533 357 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 RCVRNP35243 200 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 KIZQ2M2Z5 673 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 GOLGA7BQ2TAP0 167 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 METTL21CQ5VZV1 264 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 PRR23BQ6ZRT6 265 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 GPR142Q7Z601 462 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 TICAM1Q8IUC6 712 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 TTC39CQ8N584 583 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 SLC45A3Q96JT2 553 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 SNX25Q9H3E2 840 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 PLEKHA5Q9HAU0 1116 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 ZBTB26Q9HCK0 441 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 SETD4Q9NVD3 440 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 SNTG2Q9NY99 539 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 BFARQ9NZS9 450 aa13.97□□□□□ -0.17
SDC1-202ENST00000381150 BCLAF3A2AJT9 711 aaKnown RBP13.96□□□□□ -0.17
SDC1-202ENST00000381150 ACOT8O14734 319 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 INPP4BO15327 924 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 ADORA2BP29275 332 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 PRDX6P30041 224 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 ALDH3B2P48448 385 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 CARM1Q86X55 608 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 LZTR1Q8N653 840 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 USP33Q8TEY7 942 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 BIRC8Q96P09 236 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 EIF2AQ9BY44 585 aaKnown RBP13.96□□□□□ -0.17
SDC1-202ENST00000381150 POLE4Q9NR33 117 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 VPS45Q9NRW7 570 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 DTLQ9NZJ0 730 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 OAZ3Q9UMX2 235 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 DERAQ9Y315 318 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 TCAF2A6NFQ2 919 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 DPYSL4O14531 572 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 HSPA8P11142 646 aaKnown RBP13.96□□□□□ -0.17
SDC1-202ENST00000381150 RAD23AP54725 363 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 RHDQ02161 417 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 PRKAA1Q13131 559 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 ZNF280DQ6N043 979 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 TIFABQ6ZNK6 161 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 FAM35AQ86V20 835 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 SLC41A1Q8IVJ1 513 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 RYBPQ8N488 228 aaPredicted RBP13.96□□□□□ -0.17
SDC1-202ENST00000381150 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.96□□□□□ -0.17
SDC1-202ENST00000381150 TBC1D15Q8TC07 691 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 RSPH1Q8WYR4 309 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 UPF1Q92900 1129 aaKnown RBP eCLIP13.96□□□□□ -0.173e-15■■■■■ 66.8
SDC1-202ENST00000381150 SNX27Q96L92 541 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 ZNF597Q96LX8 424 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 CCDC138Q96M89 665 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 BEGAINQ9BUH8 593 aa13.96□□□□□ -0.17
SDC1-202ENST00000381150 GPC6Q9Y625 555 aaPredicted RBP13.96□□□□□ -0.17
SDC1-202ENST00000381150 NR5A2O00482 541 aa13.96□□□□□ -0.18
SDC1-202ENST00000381150 GRID2O43424 1007 aa13.96□□□□□ -0.18
SDC1-202ENST00000381150 ALDH4A1P30038 563 aa13.96□□□□□ -0.18
SDC1-202ENST00000381150 PFKPQ01813 784 aa13.96□□□□□ -0.18
SDC1-202ENST00000381150 CTBP1Q13363 440 aa13.96□□□□□ -0.18
SDC1-202ENST00000381150 GRM3Q14832 879 aa13.96□□□□□ -0.18
SDC1-202ENST00000381150 ARMCX6Q7L4S7 300 aa13.96□□□□□ -0.18
SDC1-202ENST00000381150 LYSMD3Q7Z3D4 306 aa13.96□□□□□ -0.18
SDC1-202ENST00000381150 ASB9Q96DX5 294 aa13.96□□□□□ -0.18
SDC1-202ENST00000381150 P2RY11Q96G91 374 aa13.96□□□□□ -0.18
SDC1-202ENST00000381150 VPS39Q96JC1 886 aa13.96□□□□□ -0.18
SDC1-202ENST00000381150 NEURL2Q9BR09 285 aa13.96□□□□□ -0.18
SDC1-202ENST00000381150 SLC2A11Q9BYW1 496 aa13.96□□□□□ -0.18
SDC1-202ENST00000381150 FANCEQ9HB96 536 aa13.96□□□□□ -0.18
SDC1-202ENST00000381150 FBRSL1Q9HCM7 1045 aaKnown RBP13.96□□□□□ -0.18
SDC1-202ENST00000381150 SCN4AP35499 1836 aa13.96□□□□□ -0.18
SDC1-202ENST00000381150 UNCXA6NJT0 531 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 C9IYK1 514 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 EI24O14681 340 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 SRP72O76094 671 aaKnown RBP13.95□□□□□ -0.18
SDC1-202ENST00000381150 CCNA2P20248 432 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 JAK1P23458 1154 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 CLCN2P51788 898 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 NKX2-5P52952 324 aaPredicted RBP13.95□□□□□ -0.18
SDC1-202ENST00000381150 PLIN5Q00G26 463 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 DCAF4L1Q3SXM0 396 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 CCDC80Q76M96 950 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 PIWIL3Q7Z3Z3 882 aaKnown RBP13.95□□□□□ -0.18
SDC1-202ENST00000381150 BTLAQ7Z6A9 289 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 NPLOC4Q8TAT6 608 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 C18orf25Q96B23 403 aaPredicted RBP13.95□□□□□ -0.18
SDC1-202ENST00000381150 TINF2Q9BSI4 451 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 GIMAP2Q9UG22 337 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 ZNF229Q9UJW7 825 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 FADS3Q9Y5Q0 445 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 AGRPO00253 132 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 UBDO15205 165 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 PIGFQ07326 219 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 DPYSQ14117 519 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 RPS6KA2Q15349 733 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 HMBOX1Q6NT76 420 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 CCDC185Q8N715 623 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 CPNE1Q99829 537 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 C11orf84Q9BUA3 381 aaPredicted RBP13.95□□□□□ -0.18
SDC1-202ENST00000381150 ABHD16BQ9H3Z7 469 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 SPAG4Q9NPE6 437 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 CROTQ9UKG9 612 aa13.95□□□□□ -0.18
SDC1-202ENST00000381150 VANGL2Q9ULK5 521 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms