RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 CYP2U1Q7Z449 544 aa18.48■□□□□ 0.55
PBX3-202ENST00000373482 SLC41A1Q8IVJ1 513 aa18.48■□□□□ 0.55
PBX3-202ENST00000373482 ZNF567Q8N184 647 aa18.48■□□□□ 0.55
PBX3-202ENST00000373482 SLC35B2Q8TB61 432 aa18.48■□□□□ 0.55
PBX3-202ENST00000373482 ARRDC2Q8TBH0 407 aa18.48■□□□□ 0.55
PBX3-202ENST00000373482 SNX19Q92543 992 aa18.48■□□□□ 0.55
PBX3-202ENST00000373482 ECHDC3Q96DC8 303 aa18.48■□□□□ 0.55
PBX3-202ENST00000373482 PHOX2BQ99453 314 aa18.48■□□□□ 0.55
PBX3-202ENST00000373482 SLC25A51Q9H1U9 297 aa18.48■□□□□ 0.55
PBX3-202ENST00000373482 C10orf88Q9H8K7 445 aa18.48■□□□□ 0.55
PBX3-202ENST00000373482 GLOD4Q9HC38 313 aa18.48■□□□□ 0.55
PBX3-202ENST00000373482 HOMER3Q9NSC5 361 aa18.48■□□□□ 0.55
PBX3-202ENST00000373482 NCDNQ9UBB6 729 aa18.48■□□□□ 0.55
PBX3-202ENST00000373482 DNPEPQ9ULA0 475 aa18.48■□□□□ 0.55
PBX3-202ENST00000373482 CTAGE9A4FU28 777 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 UPK3BL1B0FP48 263 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 UPK3BL2E5RIL1 263 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 TSPAN6O43657 245 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 LIASO43766 372 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 EPN2O95208 641 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 CPP00450 1065 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 TIMP2P16035 220 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 CD86P42081 329 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 PTGER3P43115 390 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 CCR5P51681 352 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 TAS2R38P59533 333 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 CREB5Q02930 508 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 NIPAL4Q0D2K0 466 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 TRAF2Q12933 501 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 ZSCAN30Q86W11 494 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 NDUFAF2Q8N183 169 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 C17orf53Q8N3J3 647 aaPredicted RBP18.47■□□□□ 0.55
PBX3-202ENST00000373482 RASGEF1CQ8N431 466 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 IMP4Q96G21 291 aaKnown RBP18.47■□□□□ 0.55
PBX3-202ENST00000373482 FEM1CQ96JP0 617 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 WDR24Q96S15 920 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 RSPH14Q9UHP6 348 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 PHTF1Q9UMS5 762 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.47■□□□□ 0.55
PBX3-202ENST00000373482 PCDHB9Q9Y5E1 797 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 PCDHGA5Q9Y5G8 931 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 RAI2Q9Y5P3 530 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 FADS3Q9Y5Q0 445 aa18.47■□□□□ 0.55
PBX3-202ENST00000373482 USP34Q70CQ2 3546 aa18.46■□□□□ 0.55
PBX3-202ENST00000373482 PGRMC1O00264 195 aaKnown RBP18.46■□□□□ 0.55
PBX3-202ENST00000373482 RNGTTO60942 597 aaKnown RBP18.46■□□□□ 0.55
PBX3-202ENST00000373482 RETP07949 1114 aa18.46■□□□□ 0.55
PBX3-202ENST00000373482 NFKB1P19838 968 aa18.46■□□□□ 0.55
PBX3-202ENST00000373482 STIP1P31948 543 aaKnown RBP18.46■□□□□ 0.55
PBX3-202ENST00000373482 ABL2P42684 1182 aa18.46■□□□□ 0.55
PBX3-202ENST00000373482 CCNG2Q16589 344 aa18.46■□□□□ 0.55
PBX3-202ENST00000373482 KIAA1161Q6NSJ0 714 aa18.46■□□□□ 0.55
PBX3-202ENST00000373482 PRPF39Q86UA1 669 aaKnown RBP18.46■□□□□ 0.55
PBX3-202ENST00000373482 TRIM69Q86WT6 500 aa18.46■□□□□ 0.55
PBX3-202ENST00000373482 C1orf54Q8WWF1 131 aa18.46■□□□□ 0.55
PBX3-202ENST00000373482 ATG4AQ8WYN0 398 aa18.46■□□□□ 0.55
PBX3-202ENST00000373482 BIRC7Q96CA5 298 aa18.46■□□□□ 0.55
PBX3-202ENST00000373482 NSMCE3Q96MG7 304 aa18.46■□□□□ 0.55
PBX3-202ENST00000373482 RBM15Q96T37 977 aaKnown RBP eCLIP18.46■□□□□ 0.55
PBX3-202ENST00000373482 HINFPQ9BQA5 517 aa18.46■□□□□ 0.55
PBX3-202ENST00000373482 TMEM121Q9BTD3 319 aa18.46■□□□□ 0.55
PBX3-202ENST00000373482 TDRD1Q9BXT4 1180 aaKnown RBP18.46■□□□□ 0.55
PBX3-202ENST00000373482 USP29Q9HBJ7 922 aa18.46■□□□□ 0.55
PBX3-202ENST00000373482 TTC7AQ9ULT0 858 aaPredicted RBP18.46■□□□□ 0.55
PBX3-202ENST00000373482 ZNF148Q9UQR1 794 aa18.46■□□□□ 0.55
PBX3-202ENST00000373482 SCN8AQ9UQD0 1980 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 PGLSO95336 258 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 MMP2P08253 660 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 PRLRP16471 622 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 ITPKAP23677 461 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 ACTN2P35609 894 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 NUDT1P36639 197 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 TNNT3P45378 269 aaPredicted RBP18.45■□□□□ 0.54
PBX3-202ENST00000373482 EPHB1P54762 984 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 RPS21P63220 83 aaKnown RBP18.45■□□□□ 0.54
PBX3-202ENST00000373482 SKOR1P84550 965 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 SNX1Q13596 522 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 SLC14A2Q15849 920 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 LRRC73Q5JTD7 316 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 ANKRD20A2Q5SQ80 823 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 FAM182AQ5T1J6 154 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 ANKRD20A1Q5TYW2 823 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 ANKRD20A3Q5VUR7 823 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 RABEPKQ7Z6M1 372 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 HORMAD1Q86X24 394 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 ZSWIM9Q86XI8 627 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 SYT12Q8IV01 421 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 CXorf40AQ8TE69 158 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 SPOCK2Q92563 424 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 PIGKQ92643 395 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 PPP1R2P1Q96PQ5 205 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 ARRDC1-AS1Q9H2J1 176 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 PCDH9Q9HC56 1237 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 PCDH12Q9NPG4 1184 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 SUSD2Q9UGT4 822 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 EIF2B4Q9UI10 523 aaKnown RBP18.45■□□□□ 0.54
PBX3-202ENST00000373482 MYLKQ15746 1914 aa18.45■□□□□ 0.54
PBX3-202ENST00000373482 TDRD6O60522 2096 aaKnown RBP18.45■□□□□ 0.54
PBX3-202ENST00000373482 CACNA1EQ15878 2313 aa18.44■□□□□ 0.54
PBX3-202ENST00000373482 A0A1W2PQU0 124 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms