RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 RAP1GDS1P52306 607 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 GPX6P59796 221 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 CHI3L2Q15782 390 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 TEX44Q53QW1 395 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 ACSBG2Q5FVE4 666 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 PLPP4Q5VZY2 271 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 SLC9A4Q6AI14 798 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 C4orf22Q6V702 233 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 TAS2R42Q7RTR8 314 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 FLCNQ8NFG4 579 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 OR6Y1Q8NGX8 325 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 OR6K2Q8NGY2 324 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 DACT3Q96B18 629 aaPredicted RBP9.26□□□□□ -0.93
CALD1-202ENST00000361901 CINPQ9BW66 212 aaPredicted RBP9.26□□□□□ -0.93
CALD1-202ENST00000361901 TM6SF2Q9BZW4 377 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 TASP1Q9H6P5 420 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 ACSS3Q9H6R3 686 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 STX18Q9P2W9 335 aaKnown RBP9.26□□□□□ -0.93
CALD1-202ENST00000361901 ZNF229Q9UJW7 825 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 AAR2Q9Y312 384 aaKnown RBP9.26□□□□□ -0.93
CALD1-202ENST00000361901 MTMR11A4FU01 709 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 KCNU1A8MYU2 1149 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 CXCL14O95715 111 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 NCF2P19878 526 aaPredicted RBP9.26□□□□□ -0.93
CALD1-202ENST00000361901 CST5P28325 142 aaPredicted RBP9.26□□□□□ -0.93
CALD1-202ENST00000361901 GLUD2P49448 558 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 PRMT2P55345 433 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 RPS24P62847 133 aaKnown RBP9.26□□□□□ -0.93
CALD1-202ENST00000361901 PPP2R2DQ66LE6 453 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 LINGO4Q6UY18 593 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 NECAB2Q7Z6G3 386 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 SPATA6LQ8N4H0 392 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 TMEM199Q8N511 208 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 OR7D4Q8NG98 312 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 OSCP1Q8WVF1 389 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 MAGEB18Q96M61 343 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 TSSK1BQ9BXA7 367 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 SLC17A7Q9P2U7 560 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 HEY2Q9UBP5 337 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 RABGEF1Q9UJ41 708 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 DNMT3LQ9UJW3 386 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 LSM7Q9UK45 103 aaKnown RBP9.26□□□□□ -0.93
CALD1-202ENST00000361901 PHGDHO43175 533 aaKnown RBP9.26□□□□□ -0.93
CALD1-202ENST00000361901 TPPPO94811 219 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 CLTBP09497 229 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 ANPEPP15144 967 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 GABRR2P28476 465 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 HMOX2P30519 316 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 PGFP49763 221 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 RENBPP51606 427 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 KPNA1P52294 538 aaPredicted RBP9.26□□□□□ -0.93
CALD1-202ENST00000361901 CDH17Q12864 832 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 CTBP1Q13363 440 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 SLC39A5Q6ZMH5 540 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 NEK10Q6ZWH5 1172 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 CMC1Q7Z7K0 106 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 TRABD2AQ86V40 505 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 PSMG2Q969U7 264 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 MECRQ9BV79 373 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 FRMD8Q9BZ67 464 aaPredicted RBP9.26□□□□□ -0.93
CALD1-202ENST00000361901 MANSC1Q9H8J5 431 aa9.26□□□□□ -0.93
CALD1-202ENST00000361901 CXorf49A8MYA2 514 aaPredicted RBP9.25□□□□□ -0.93
CALD1-202ENST00000361901 ADAM12O43184 909 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 CRCPO75575 148 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 HSPA4LO95757 839 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 MSL3P1P0C860 447 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 VARSP26640 1264 aaKnown RBP9.25□□□□□ -0.93
CALD1-202ENST00000361901 SPRP35270 261 aaPredicted RBP9.25□□□□□ -0.93
CALD1-202ENST00000361901 GEMP55040 296 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 ITGADQ13349 1161 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 XKR4Q5GH76 650 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 WDR45BQ5MNZ6 344 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 KLHDC10Q6PID8 442 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 RHBDF2Q6PJF5 856 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 KCNMB4Q86W47 210 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 TLCD1Q96CP7 247 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 SEMA3CQ99985 751 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 TPK1Q9H3S4 243 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 EBF3Q9H4W6 596 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 CAB39LQ9H9S4 337 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 SPG21Q9NZD8 308 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 DAPK2Q9UIK4 370 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 PLXNA1Q9UIW2 1896 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 SLC38A8A6NNN8 435 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 PABPC4LP0CB38 370 aaKnown RBP9.25□□□□□ -0.93
CALD1-202ENST00000361901 CTNNB1P35222 781 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 DSC3Q14574 896 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 SLC1A5Q15758 541 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 FXNQ16595 210 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 EGFLAMQ63HQ2 1017 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 CRLF3Q8IUI8 442 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 ARID3BQ8IVW6 561 aaPredicted RBP9.25□□□□□ -0.93
CALD1-202ENST00000361901 FAM126BQ8IXS8 530 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 FIBCD1Q8N539 461 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 NPWQ8N729 165 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 ARL14EPQ8N8R7 260 aaPredicted RBP9.25□□□□□ -0.93
CALD1-202ENST00000361901 CKAP2Q8WWK9 683 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 GATA6Q92908 595 aa9.25□□□□□ -0.93
CALD1-202ENST00000361901 TMA16Q96EY4 203 aaKnown RBP9.25□□□□□ -0.93
CALD1-202ENST00000361901 VPS39Q96JC1 886 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms