RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 SERPINA6P08185 405 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 DRD4P21917 467 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 SERPINA4P29622 427 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 LSM12Q3MHD2 195 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 LIN52Q52LA3 116 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 TCEAL6Q6IPX3 200 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 AAGABQ6PD74 315 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 ZNF398Q8TD17 642 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 SENP6Q9GZR1 1112 aaPredicted RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 DDX3XO00571 662 aaKnown RBP eCLIP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 TRIM38O00635 465 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 PPIBP23284 216 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 ATP5F1P24539 256 aaPredicted RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 ACAT1P24752 427 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 MTX3Q5HYI7 312 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 C6orf52Q5T4I8 152 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 FAM171BQ6P995 826 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 SLC4A5Q9BY07 1137 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 SPON1Q9HCB6 807 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 ABI3Q9P2A4 366 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 SLC27A6Q9Y2P4 619 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 PRAMEF33A0A0G2JMD5 474 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 VSTM5A8MXK1 200 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 TPP1O14773 563 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 PRAMEF10O60809 474 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 DLG1Q12959 904 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 PTPRNQ16849 979 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 ANKRD26P1Q6NSI1 321 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 PTF1AQ7RTS3 328 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 PHF10Q8WUB8 498 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 TEFMQ96QE5 360 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 TUBGCP5Q96RT8 1024 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 MND1Q9BWT6 205 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 OPTCQ9UBM4 332 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 PACSIN3Q9UKS6 424 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 CDK9P50750 372 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 GRB14Q14449 540 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 CTXN3Q4LDR2 81 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 BEND7Q8N7W2 519 aaPredicted RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 FAM126AQ9BYI3 521 aaPredicted RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 IRF2BPLQ9H1B7 796 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 RAB26Q9ULW5 256 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 GRIP1Q9Y3R0 1128 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 ERBB3P21860 1342 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 SHBGP04278 402 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 TGFB3P10600 412 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 CD44P16070 742 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 PSME3P61289 254 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 HDAC2Q92769 488 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 GPATCH1Q9BRR8 931 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 PRRG4Q9BZD6 226 aa13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 DNAAF2Q9NVR5 837 aaKnown RBP13.29□□□□□ -0.28
SRGAP3-201ENST00000360413 PLOD2O00469 737 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 OGTO15294 1046 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 ALDH2P05091 517 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 NR4A1P22736 598 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 TNFRSF8P28908 595 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 USP4Q13107 963 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 ATXN7L2Q5T6C5 722 aaPredicted RBP13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 LPCAT4Q643R3 524 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 SATL1Q86VE3 508 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 ATCAYQ86WG3 371 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 TNFAIP8L1Q8WVP5 186 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 ZDHHC15Q96MV8 337 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 C2orf49Q9BVC5 232 aaPredicted RBP13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 ABCB9Q9NP78 766 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 NKIRAS2Q9NYR9 191 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 GSG1L2A8MUP6 293 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 MLYCDO95822 493 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 ITGB3P05106 788 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 CRATP43155 626 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 CACNB3P54284 484 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 S100A12P80511 92 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 ZNF549Q6P9A3 640 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 RUSC1Q9BVN2 902 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 TPK1Q9H3S4 243 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 XKR8Q9H6D3 395 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 SPG21Q9NZD8 308 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 SNAP23O00161 211 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 NCK1P16333 377 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 ZNF571Q7Z3V5 609 aaPredicted RBP13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 MILR1Q7Z6M3 343 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 ZCCHC9Q8N567 271 aaKnown RBP13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 PIH1D2Q8WWB5 315 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 HGH1Q9BTY7 390 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 ACE2Q9BYF1 805 aaPredicted RBP13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 UCKL1Q9NWZ5 548 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 A8MUI8 341 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 CHST10O43529 356 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 PIGNO95427 931 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 FAM86B2P0C5J1 330 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 PIK3R3Q92569 461 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 DIRAS2Q96HU8 199 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 OMDQ99983 421 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 PRKAB1Q9Y478 270 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 CCL15-CCL14A0A0B4J2E2 113 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 FGF10O15520 208 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms