RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 IRF9Q00978 393 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 SMARCB1Q12824 385 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 USP4Q13107 963 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 PRPSAP1Q14558 356 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 SEPT7Q16181 437 aaKnown RBP5.14□□□□□ -1.59
ATXN3-202ENST00000359366 TTC39BQ5VTQ0 682 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-202ENST00000359366 RNF219Q5W0B1 726 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-202ENST00000359366 STEAP4Q687X5 459 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 ZCCHC23Q6ZST2 131 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 SH2D5Q6ZV89 423 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 STRA8Q7Z7C7 330 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 HERC6Q8IVU3 1022 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 LMNTD2Q8IXW0 634 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 NDUFAF2Q8N183 169 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 ANKLE1Q8NAG6 615 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.14□□□□□ -1.59
ATXN3-202ENST00000359366 RIN3Q8TB24 985 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 NAT14Q8WUY8 206 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 CENPTQ96BT3 561 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 FAM136AQ96C01 138 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 FCRL5Q96RD9 977 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 SRPK1Q96SB4 655 aaKnown RBP5.14□□□□□ -1.59
ATXN3-202ENST00000359366 KLF16Q9BXK1 252 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-202ENST00000359366 MCOLN1Q9GZU1 580 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 LRRC40Q9H9A6 602 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 C6orf203Q9P0P8 240 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-202ENST00000359366 CDH22Q9UJ99 828 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 HCFC2Q9Y5Z7 792 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 RAD54BQ9Y620 910 aa5.14□□□□□ -1.59
ATXN3-202ENST00000359366 TNRC18O15417 2968 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-202ENST00000359366 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 COPEO14579 308 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 PRPF4O43172 522 aaKnown RBP eCLIP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 MTSS1O43312 755 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 SMNDC1O75940 238 aaKnown RBP eCLIP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 TMCC1O94876 653 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 MT-CO1P00395 513 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 F11P03951 625 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 SNRPAP09012 282 aaKnown RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 PRSS56P0CW18 603 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 MLNP12872 115 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 EPCAMP16422 314 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 BGNP21810 368 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 HOXD9P28356 352 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 GKP32189 559 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ADRA1AP35348 466 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 CCT8P50990 548 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 SCNN1BP51168 640 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 NDST2P52849 883 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 PDE1BQ01064 536 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 IL9RQ01113 521 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 SEMG2Q02383 582 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 GNA12Q03113 381 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 RING1Q06587 406 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 CDH17Q12864 832 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 LBRQ14739 615 aaKnown RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 CBX2Q14781 532 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 MYBPC3Q14896 1274 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 INAQ16352 499 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ZNF789Q5FWF6 425 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 C9orf50Q5SZB4 431 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 TEDDM1Q5T9Z0 273 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 THEMIS2Q5TEJ8 643 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 FAM219BQ5XKK7 198 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 TPGS2Q68CL5 300 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 NAPEPLDQ6IQ20 393 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 KCNMB4Q86W47 210 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 TCEAL8Q8IYN2 117 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 LZTR1Q8N653 840 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 TEX9Q8N6V9 391 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 CCDC63Q8NA47 563 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 KREMEN2Q8NCW0 462 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 PDCD6IPQ8WUM4 868 aaKnown RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 POF1BQ8WVV4 589 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ING5Q8WYH8 240 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 LRRC39Q96DD0 335 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 REPIN1Q9BWE0 567 aaKnown RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 APOL5Q9BWW9 433 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 FRMD8Q9BZ67 464 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 MUC3BQ9H195 1237 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 VPS11Q9H270 941 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 VCX3BQ9H321 246 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ATP13A1Q9HD20 1204 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ABCF3Q9NUQ8 709 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 CFAP97Q9P2B7 532 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 PPARGC1AQ9UBK2 798 aaKnown RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 MTO1Q9Y2Z2 717 aaKnown RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 HBS1LQ9Y450 684 aaKnown RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 CAPN7Q9Y6W3 813 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 CHD5Q8TDI0 1954 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 WASH4PA8MWX3 477 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 H0Y626 953 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 GRM6O15303 877 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 PHGDHO43175 533 aaKnown RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 BNIP3LO60238 219 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 PRAMEF11O60813 436 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 SPAG6O75602 509 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 KRT37O76014 449 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ANXA9O76027 345 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ALDH1A2O94788 518 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms