RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 MAP7D1Q3KQU3 841 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 TTC27Q6P3X3 843 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 ZC3H14Q6PJT7 736 aaKnown RBP15.68■□□□□ 0.1
TRIM13-201ENST00000356017 SLC36A4Q6YBV0 504 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 PARS2Q7L3T8 475 aaKnown RBP15.68■□□□□ 0.1
TRIM13-201ENST00000356017 SPATA22Q8NHS9 363 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 GAB3Q8WWW8 586 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 RLN3Q8WXF3 142 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 NSMCE3Q96MG7 304 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 ADGRE3Q9BY15 652 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 WSB2Q9NYS7 404 aaPredicted RBP15.68■□□□□ 0.1
TRIM13-201ENST00000356017 PCYOX1Q9UHG3 505 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 RPL26L1Q9UNX3 145 aaKnown RBP15.68■□□□□ 0.1
TRIM13-201ENST00000356017 PCDHB9Q9Y5E1 797 aa15.68■□□□□ 0.1
TRIM13-201ENST00000356017 CACNA1IQ9P0X4 2223 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 IGHV1OR15-9A0A0B4J2B8 117 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 MAP3K13O43283 966 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 RPP40O75818 363 aaKnown RBP15.67■□□□□ 0.1
TRIM13-201ENST00000356017 PGLSO95336 258 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 MT-CYBP00156 380 aaPredicted RBP15.67■□□□□ 0.1
TRIM13-201ENST00000356017 EPOP01588 193 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 ELP6Q0PNE2 266 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 PIP5KL1Q5T9C9 394 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 AGBL4Q5VU57 503 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 CCDC70Q6NSX1 233 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 FAM124AQ86V42 546 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 SPATA4Q8NEY3 305 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 OR14C36Q8NHC7 312 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 SLCO2A1Q92959 643 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 IFT43Q96FT9 208 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 DDX47Q9H0S4 455 aaKnown RBP15.67■□□□□ 0.1
TRIM13-201ENST00000356017 PCDH9Q9HC56 1237 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 SERGEFQ9UGK8 458 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 PHTF1Q9UMS5 762 aa15.67■□□□□ 0.1
TRIM13-201ENST00000356017 LRRC72A6NJI9 287 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 UPK3BL1B0FP48 263 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 UPK3BL2E5RIL1 263 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 PSMD3O43242 534 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 PLRG1O43660 514 aaKnown RBP15.66■□□□□ 0.1
TRIM13-201ENST00000356017 AP1G1O43747 822 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 FZD6O60353 706 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 NDUFS2O75306 463 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 ECEL1O95672 775 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 CPP00450 1065 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 PSMB4P28070 264 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 FDFT1P37268 417 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 EPHB1P54762 984 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 CDK18Q07002 472 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 FAM182AQ5T1J6 154 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 ERAP2Q6P179 960 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 ZNF572Q7Z3I7 529 aaPredicted RBP15.66■□□□□ 0.1
TRIM13-201ENST00000356017 CCHCR1Q8TD31 782 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 TOE1Q96GM8 510 aaKnown RBP15.66■□□□□ 0.1
TRIM13-201ENST00000356017 FSD1LQ9BXM9 530 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 PCED1AQ9H1Q7 454 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 UBP1Q9NZI7 540 aa15.66■□□□□ 0.1
TRIM13-201ENST00000356017 TPX2Q9ULW0 747 aaKnown RBP15.66■□□□□ 0.1
TRIM13-201ENST00000356017 ERI2A8K979 691 aaKnown RBP15.65■□□□□ 0.1
TRIM13-201ENST00000356017 H0Y858 1186 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 PLK4O00444 970 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 PMPCBO75439 489 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 TIMP2P16035 220 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 ACSL1P33121 698 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 RPL22P35268 128 aaKnown RBP15.65■□□□□ 0.1
TRIM13-201ENST00000356017 ADPRHP54922 357 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 IHHQ14623 411 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 SPDYCQ5MJ68 293 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 NEK5Q6P3R8 708 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 KLHL7Q8IXQ5 586 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 OXNAD1Q96HP4 312 aaPredicted RBP15.65■□□□□ 0.1
TRIM13-201ENST00000356017 FEM1CQ96JP0 617 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 PREBQ9HCU5 417 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 CD93Q9NPY3 652 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 CHKBQ9Y259 395 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 PPIL1Q9Y3C6 166 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 MRFAP1Q9Y605 127 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 E7EVH7 732 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 NEMP1O14524 444 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 TSPAN6O43657 245 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 LILRB5O75023 590 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 METTL18O95568 372 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 SEMA4FO95754 770 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 PRLP01236 227 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 KRT14P02533 472 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 PDHA1P08559 390 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 GRIA4P48058 902 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 PTPN5P54829 565 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 WNT3AP56704 352 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 PPP1R7Q15435 360 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 PCSK7Q16549 785 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 KDELC1Q6UW63 502 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 SYDE1Q6ZW31 735 aaPredicted RBP15.65■□□□□ 0.1
TRIM13-201ENST00000356017 USP45Q70EL2 814 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 ZSWIM9Q86XI8 627 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 KLHDC8BQ8IXV7 354 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 FAM160A2Q8N612 972 aaPredicted RBP15.65■□□□□ 0.1
TRIM13-201ENST00000356017 GLIS1Q8NBF1 620 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 MNS1Q8NEH6 495 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 CADM4Q8NFZ8 388 aa15.65■□□□□ 0.1
TRIM13-201ENST00000356017 OR2T34Q8NGX1 318 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms