RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 CCDC126Q96EE4 140 aa16.86■□□□□ 0.29
SSH1-201ENST00000326470 ELMO2Q96JJ3 720 aa16.86■□□□□ 0.29
SSH1-201ENST00000326470 TNIP3Q96KP6 325 aa16.86■□□□□ 0.29
SSH1-201ENST00000326470 HNRNPABQ99729 332 aaKnown RBP16.86■□□□□ 0.29
SSH1-201ENST00000326470 DCUN1D5Q9BTE7 237 aa16.86■□□□□ 0.29
SSH1-201ENST00000326470 ADI1Q9BV57 179 aa16.86■□□□□ 0.29
SSH1-201ENST00000326470 ARHGEF38Q9NXL2 777 aa16.86■□□□□ 0.29
SSH1-201ENST00000326470 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.86■□□□□ 0.29
SSH1-201ENST00000326470 CDC14AQ9UNH5 594 aa16.86■□□□□ 0.29
SSH1-201ENST00000326470 WDR90Q96KV7 1748 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 PIRO00625 290 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 CBFA2T3O75081 653 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 BEST1O76090 585 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 HMOX2P30519 316 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 MAP7D1Q3KQU3 841 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 OTOP3Q7RTS5 596 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 LYSMD3Q7Z3D4 306 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 ERO1BQ86YB8 467 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 ZBTB8BQ8NAP8 495 aaPredicted RBP16.85■□□□□ 0.29
SSH1-201ENST00000326470 FAM110BQ8TC76 370 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 GIPC3Q8TF64 312 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 KCTD13Q8WZ19 329 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 IGSF5Q9NSI5 407 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 RNF19AQ9NV58 838 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 GDAP2Q9NXN4 497 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 MTF2Q9Y483 593 aaPredicted RBP16.85■□□□□ 0.29
SSH1-201ENST00000326470 TANC1Q9C0D5 1861 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 CACNG3O60359 315 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 FYNP06241 537 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 NPR3P17342 541 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 ACADVLP49748 655 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 RAB15P59190 212 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 MERTKQ12866 999 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 ESRP1Q6NXG1 681 aaKnown RBP16.85■□□□□ 0.29
SSH1-201ENST00000326470 SIX6OS1Q8N1H7 587 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 SNX31Q8N9S9 440 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 B3GALNT2Q8NCR0 500 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 SHCBP1Q8NEM2 672 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 APPL2Q8NEU8 664 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 OR9I1Q8NGQ6 314 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 ZNF420Q8TAQ5 688 aaPredicted RBP16.85■□□□□ 0.29
SSH1-201ENST00000326470 ROPN1LQ96C74 230 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 SLC39A3Q9BRY0 314 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 NPLQ9BXD5 320 aaPredicted RBP16.85■□□□□ 0.29
SSH1-201ENST00000326470 RHOBTB2Q9BYZ6 727 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 CDHR5Q9HBB8 845 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 CYP4F12Q9HCS2 524 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 FBXW11Q9UKB1 542 aa16.85■□□□□ 0.29
SSH1-201ENST00000326470 UBQLN1Q9UMX0 589 aaKnown RBP16.85■□□□□ 0.29
SSH1-201ENST00000326470 COQ9O75208 318 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 IPO13O94829 963 aaKnown RBP16.84■□□□□ 0.29
SSH1-201ENST00000326470 KCNA5P22460 613 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 HOXA11P31270 313 aaPredicted RBP16.84■□□□□ 0.29
SSH1-201ENST00000326470 TTKP33981 857 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 SLC1A2P43004 574 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 CD151P48509 253 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 ATP4BP51164 291 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 PFKPQ01813 784 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 POU4F1Q01851 419 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 GALNT1Q10472 559 aaPredicted RBP16.84■□□□□ 0.29
SSH1-201ENST00000326470 CBX3Q13185 183 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 POU6F1Q14863 301 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 TECRLQ5HYJ1 363 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 ALKAL1Q6UXT8 129 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 EPHX4Q8IUS5 362 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 VPS50Q96JG6 964 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 DOK1Q99704 481 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 EIF2AQ9BY44 585 aaKnown RBP16.84■□□□□ 0.29
SSH1-201ENST00000326470 CXorf21Q9HAI6 301 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 TBC1D23Q9NUY8 699 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 GMPR2Q9P2T1 348 aaKnown RBP16.84■□□□□ 0.29
SSH1-201ENST00000326470 AAR2Q9Y312 384 aaKnown RBP16.84■□□□□ 0.29
SSH1-201ENST00000326470 PPP2R3BQ9Y5P8 575 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 DNAJC25-GNG10A0A024R161 153 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 AQP12BA6NM10 295 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 A8MT66 165 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 ATE1O95260 518 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 VARSP26640 1264 aaKnown RBP16.84■□□□□ 0.29
SSH1-201ENST00000326470 SLC5A3P53794 718 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 SLC12A2P55011 1212 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 FAM83EQ2M2I3 478 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 ANKDD1AQ495B1 522 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 SLC36A3Q495N2 470 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 SLC44A4Q53GD3 710 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 PITRM1Q5JRX3 1037 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 TBCELQ5QJ74 424 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 LIMS2Q7Z4I7 341 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 AQP12AQ8IXF9 295 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 C2CD4AQ8NCU7 369 aaPredicted RBP16.84■□□□□ 0.29
SSH1-201ENST00000326470 RPF2Q9H7B2 306 aaKnown RBP16.84■□□□□ 0.29
SSH1-201ENST00000326470 CHST12Q9NRB3 414 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 AGPAT4Q9NRZ5 378 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 TLL2Q9Y6L7 1015 aa16.84■□□□□ 0.29
SSH1-201ENST00000326470 COL1A2P08123 1366 aa16.83■□□□□ 0.29
SSH1-201ENST00000326470 TSC2P49815 1807 aa16.83■□□□□ 0.29
SSH1-201ENST00000326470 CLDN5O00501 218 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 NRP1O14786 923 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 CNMDO75829 334 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 SLC25A27O95847 323 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 ARHGAP1Q07960 439 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms