RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 TEX44Q53QW1 395 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 INTS6LQ5JSJ4 861 aaKnown RBP12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 PLPP4Q5VZY2 271 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 SLC26A9Q7LBE3 791 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 WDR36Q8NI36 951 aaKnown RBP12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 ANAPC2Q9UJX6 822 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 A0A1W2PQH9 124 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 SLC28A1O00337 649 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 TSPAN1O60635 241 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 AVILO75366 819 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 PDE5AO76074 875 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 MACC1Q6ZN28 852 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 GPR152Q8TDT2 470 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 ALG3Q92685 438 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 CD101Q93033 1021 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 RMND5BQ96G75 393 aaPredicted RBP12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 C12orf42Q96LP6 360 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 CSPG4P5Q96PW8 444 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 B3GNT5Q9BYG0 378 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 CYLDQ9NQC7 956 aa12.04□□□□□ -0.48
AMBRA1-201ENST00000314845 C5orf60A6NFR6 353 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 BIRC5O15392 142 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 SMNDC1O75940 238 aaKnown RBP eCLIP12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 NTRK1P04629 796 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 SNRPB2P08579 225 aaKnown RBP12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 UMPSP11172 480 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 CTPS1P17812 591 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 ZNF280AP59817 542 aaPredicted RBP12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 BST1Q10588 318 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 PRKG2Q13237 762 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 PDK4Q16654 411 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 OLFML2BQ68BL8 750 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 EPHX4Q8IUS5 362 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 CLYBLQ8N0X4 340 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 EFCAB3Q8N7B9 438 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 C1orf127Q8N9H9 656 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 MTFMTQ96DP5 389 aaKnown RBP12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 TRMOQ9BU70 441 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 SPATA5L1Q9BVQ7 753 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 STMN3Q9NZ72 180 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 SRRM3A6NNA2 597 aaPredicted RBP12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 SYN3O14994 580 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 RHOQP17081 205 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 MYL12AP19105 171 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 CTBP1Q13363 440 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 SH3BP5LQ7L8J4 393 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 CD99L2Q8TCZ2 262 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 GDPD5Q8WTR4 605 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 SMG7Q92540 1137 aaKnown RBP12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 ERLEC1Q96DZ1 483 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 MYO19Q96H55 970 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 ACBD6Q9BR61 282 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 RHOJQ9H4E5 214 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 BRD9Q9H8M2 597 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 XPR1Q9UBH6 696 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 RAB23Q9ULC3 237 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 TBC1D30Q9Y2I9 924 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 RPTORQ8N122 1335 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 SNX3O60493 162 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 ATP6V1G2O95670 118 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 FGBP02675 491 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 PRKAG1P54619 331 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 ARMCX4Q5H9R4 360 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 IRF2BP1Q8IU81 584 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 PHC3Q8NDX5 983 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 UPF1Q92900 1129 aaKnown RBP eCLIP12.03□□□□□ -0.482e-9■■■■■ 38.6
AMBRA1-201ENST00000314845 COL26A1Q96A83 441 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 KLHL5Q96PQ7 755 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 ASF1AQ9Y294 204 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 ARIH1Q9Y4X5 557 aaPredicted RBP12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 C1RP00736 705 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 IFNA16P05015 189 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 MC4RP32245 332 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 BIKQ13323 160 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 GALNT3Q14435 633 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 LIPMQ5VYY2 423 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 CDC73Q6P1J9 531 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 LRP10Q7Z4F1 713 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 CDYL2Q8N8U2 506 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 PCDHB18PQ96TA0 734 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 GMIPQ9P107 970 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 LRCH1Q9Y2L9 728 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 RWDD3Q9Y3V2 267 aa12.03□□□□□ -0.48
AMBRA1-201ENST00000314845 TCRBV9S1A1TA0A576 114 aa12.02□□□□□ -0.48
AMBRA1-201ENST00000314845 ISM1B1AKI9 464 aa12.02□□□□□ -0.48
AMBRA1-201ENST00000314845 PRMT5O14744 637 aaPredicted RBP12.02□□□□□ -0.48
AMBRA1-201ENST00000314845 NFATC1O95644 943 aa12.02□□□□□ -0.48
AMBRA1-201ENST00000314845 FLT3P36888 993 aa12.02□□□□□ -0.48
AMBRA1-201ENST00000314845 FEN1P39748 380 aaKnown RBP12.02□□□□□ -0.48
AMBRA1-201ENST00000314845 CRATP43155 626 aa12.02□□□□□ -0.48
AMBRA1-201ENST00000314845 PPIGQ13427 754 aaKnown RBP eCLIP12.02□□□□□ -0.483e-7■■□□□ 12.3
AMBRA1-201ENST00000314845 CNSTQ6PJW8 725 aa12.02□□□□□ -0.48
AMBRA1-201ENST00000314845 XYLT1Q86Y38 959 aa12.02□□□□□ -0.48
AMBRA1-201ENST00000314845 PCDH20Q8N6Y1 951 aaKnown RBP12.02□□□□□ -0.48
AMBRA1-201ENST00000314845 RERGQ96A58 199 aaPredicted RBP12.02□□□□□ -0.48
AMBRA1-201ENST00000314845 FAM84AQ96KN4 292 aa12.02□□□□□ -0.48
AMBRA1-201ENST00000314845 MIR1-1HGQ9H1L0 117 aa12.02□□□□□ -0.48
AMBRA1-201ENST00000314845 TMPRSS4Q9NRS4 437 aa12.02□□□□□ -0.48
AMBRA1-201ENST00000314845 RPS6KA6Q9UK32 745 aa12.02□□□□□ -0.48
AMBRA1-201ENST00000314845 PCDHGC3Q9UN70 934 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms