RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 VAPBO95292 243 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 NDST3O95803 873 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 MZF1P28698 734 aaPredicted RBP11.98□□□□□ -0.49
TRIM40-205ENST00000307859 IRS1P35568 1242 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 HADHAP40939 763 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 SERPINB4P48594 390 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 NUMBP49757 651 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 CSRP3P50461 194 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 PDE1BQ01064 536 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 CDH18Q13634 790 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 CNGA3Q16281 694 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 UGP2Q16851 508 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 INSCQ1MX18 579 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 INO80DQ53TQ3 878 aaPredicted RBP11.98□□□□□ -0.49
TRIM40-205ENST00000307859 KYAT3Q6YP21 454 aaKnown RBP11.98□□□□□ -0.49
TRIM40-205ENST00000307859 NLRP9Q7RTR0 991 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 ZC3HC1Q86WB0 502 aaKnown RBP11.98□□□□□ -0.49
TRIM40-205ENST00000307859 TDRD5Q8NAT2 981 aaKnown RBP11.98□□□□□ -0.49
TRIM40-205ENST00000307859 LEMD2Q8NC56 503 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 WFDC5Q8TCV5 224 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 PEX13Q92968 403 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 IFT43Q96FT9 208 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 VPS39Q96JC1 886 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 CABS1Q96KC9 395 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 NUDCD1Q96RS6 583 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 GPR22Q99680 433 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 FEM1AQ9BSK4 669 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 FAM167BQ9BTA0 163 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 PITPNM3Q9BZ71 974 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 SLC13A1Q9BZW2 595 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 RHOJQ9H4E5 214 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 NOD2Q9HC29 1040 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 SNX15Q9NRS6 342 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 STARD13Q9Y3M8 1113 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 CHD9Q3L8U1 2897 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 BPTFQ12830 3046 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 E2F8A0AVK6 867 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 KLF11O14901 512 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 INSIG1O15503 277 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 LDB2O43679 373 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 SNAP91O60641 907 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 RFPL2O75678 378 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 TMCC1O94876 653 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 CSPG5O95196 566 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 POU2F2P09086 479 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 HNRNPA1P09651 372 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRIM40-205ENST00000307859 MYOGP15173 224 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 PTPN2P17706 415 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 CSKP41240 450 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 ACVR1Q04771 509 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 NSUN2Q08J23 767 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRIM40-205ENST00000307859 LAMB3Q13751 1172 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 DBN1Q16643 649 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 MPPE1Q53F39 396 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 GPR158Q5T848 1215 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 PDE12Q6L8Q7 609 aaKnown RBP11.97□□□□□ -0.49
TRIM40-205ENST00000307859 SPATA21Q7Z572 469 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 YTHDF3Q7Z739 585 aaKnown RBP11.97□□□□□ -0.49
TRIM40-205ENST00000307859 ANKS4BQ8N8V4 417 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 C2CD4AQ8NCU7 369 aaPredicted RBP11.97□□□□□ -0.49
TRIM40-205ENST00000307859 OR13J1Q8NGT2 312 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 ATP2A3Q93084 1043 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 NSMCE3Q96MG7 304 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 SLCO1B3Q9NPD5 702 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 LHX3Q9UBR4 397 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 DCDC2Q9UHG0 476 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 GGT7Q9UJ14 662 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 VPS28Q9UK41 221 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 RIMKLBQ9ULI2 386 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 PHTF1Q9UMS5 762 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 USP15Q9Y4E8 981 aaPredicted RBP11.97□□□□□ -0.49
TRIM40-205ENST00000307859 CHD7Q9P2D1 2997 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 GOLGA8TH3BQL2 631 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 SLC7A4O43246 635 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 DCXO43602 365 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 IL1BP01584 269 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 MPOP05164 745 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 RHOP08100 348 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 EPCAMP16422 314 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 GABRB3P28472 473 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 TYK2P29597 1187 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 THOC5Q13769 683 aaKnown RBP11.97□□□□□ -0.49
TRIM40-205ENST00000307859 LEXMQ3ZCV2 418 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 FYB2Q5VWT5 728 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 KIAA0408Q6ZU52 694 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 FAM47EQ6ZV65 393 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 MFN1Q8IWA4 741 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 CMTM8Q8IZV2 173 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 ARMC2Q8NEN0 867 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 MICAL1Q8TDZ2 1067 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 PTPRN2Q92932 1015 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 TCEAL4Q96EI5 215 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 SAMD11Q96NU1 681 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 TDRD1Q9BXT4 1180 aaKnown RBP11.97□□□□□ -0.49
TRIM40-205ENST00000307859 TASP1Q9H6P5 420 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 MANSC1Q9H8J5 431 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 SCUBE2Q9NQ36 999 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 SIRPGQ9P1W8 387 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 VPS51Q9UID3 782 aa11.97□□□□□ -0.49
TRIM40-205ENST00000307859 EMCNQ9ULC0 261 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms