RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 COL19A1Q14993 1142 aa17.67■□□□□ 0.42
KRT28-201ENST00000306658 GEN1Q17RS7 908 aa17.67■□□□□ 0.42
KRT28-201ENST00000306658 DGKKQ5KSL6 1271 aa17.67■□□□□ 0.42
KRT28-201ENST00000306658 TRABD2AQ86V40 505 aa17.67■□□□□ 0.42
KRT28-201ENST00000306658 KCNMB4Q86W47 210 aa17.67■□□□□ 0.42
KRT28-201ENST00000306658 SRRM1Q8IYB3 904 aaKnown RBP17.67■□□□□ 0.42
KRT28-201ENST00000306658 CPA6Q8N4T0 437 aa17.67■□□□□ 0.42
KRT28-201ENST00000306658 PCDH20Q8N6Y1 951 aaKnown RBP17.67■□□□□ 0.42
KRT28-201ENST00000306658 BRSK1Q8TDC3 778 aa17.67■□□□□ 0.42
KRT28-201ENST00000306658 ZNF778Q96MU6 729 aa17.67■□□□□ 0.42
KRT28-201ENST00000306658 CNOT10Q9H9A5 744 aaKnown RBP17.67■□□□□ 0.42
KRT28-201ENST00000306658 TXNDC16Q9P2K2 825 aa17.67■□□□□ 0.42
KRT28-201ENST00000306658 SLC8A2Q9UPR5 921 aa17.67■□□□□ 0.42
KRT28-201ENST00000306658 ANKRD36A6QL64 1941 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 ANKRD66B4E2M5 251 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 TULP3O75386 442 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 ZNF821O75541 412 aaPredicted RBP17.66■□□□□ 0.42
KRT28-201ENST00000306658 GSRP00390 522 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 PRLP01236 227 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 ASLP04424 464 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 BCL2L1Q07817 233 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 TRAF2Q12933 501 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 ADGRE1Q14246 886 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 TSTD2Q5T7W7 516 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 C22orf39Q6P5X5 142 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 ETFBKMTQ8IXQ9 262 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 RYBPQ8N488 228 aaPredicted RBP17.66■□□□□ 0.42
KRT28-201ENST00000306658 ST13P5Q8NFI4 369 aaPredicted RBP17.66■□□□□ 0.42
KRT28-201ENST00000306658 BLOC1S5Q8TDH9 187 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 PDCD6IPQ8WUM4 868 aaKnown RBP17.66■□□□□ 0.42
KRT28-201ENST00000306658 PEX13Q92968 403 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 TNKS2Q9H2K2 1166 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 POMKQ9H5K3 350 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 ATP13A3Q9H7F0 1226 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 TREX1Q9NSU2 369 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 DEC1Q9P2X7 70 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 EVLQ9UI08 416 aaPredicted RBP17.66■□□□□ 0.42
KRT28-201ENST00000306658 ERVW-1Q9UQF0 538 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 TRIOBPQ9H2D6 2365 aa17.66■□□□□ 0.42
KRT28-201ENST00000306658 CCDC78A2IDD5 438 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 MROH6A6NGR9 719 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 TRIM24O15164 1050 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 CRTAMO95727 393 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 SNRPAP09012 282 aaKnown RBP17.65■□□□□ 0.42
KRT28-201ENST00000306658 CNTFP26441 200 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 ATP1A2P50993 1020 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 RAD51Q06609 339 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 DLG2Q15700 870 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 CNGA3Q16281 694 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 HSP90AA5PQ58FG0 334 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 ARMC12Q5T9G4 340 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 TMEM215Q68D42 235 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 KIAA0930Q6ICG6 404 aaPredicted RBP17.65■□□□□ 0.42
KRT28-201ENST00000306658 ESRP1Q6NXG1 681 aaKnown RBP17.65■□□□□ 0.42
KRT28-201ENST00000306658 SMRP1Q8NCR6 262 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 LPCAT1Q8NF37 534 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 GABPB2Q8TAK5 448 aaPredicted RBP17.65■□□□□ 0.42
KRT28-201ENST00000306658 MTBPQ96DY7 904 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 CPNE1Q99829 537 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 CIPCQ9C0C6 399 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 HPS4Q9NQG7 708 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 NSMCE4AQ9NXX6 385 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.65■□□□□ 0.42
KRT28-201ENST00000306658 SLCO3A1Q9UIG8 710 aa17.65■□□□□ 0.42
KRT28-201ENST00000306658 COLQQ9Y215 455 aaPredicted RBP17.65■□□□□ 0.42
KRT28-201ENST00000306658 A6NNZ2 444 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 SOCS5O75159 536 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 ECI2O75521 394 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 VAPBO95292 243 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 SRPRAP08240 638 aaKnown RBP17.64■□□□□ 0.42
KRT28-201ENST00000306658 PDHA1P08559 390 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 BRAFP15056 766 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 VASPP50552 380 aaPredicted RBP17.64■□□□□ 0.42
KRT28-201ENST00000306658 EPHB1P54762 984 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 RPL26P61254 145 aaKnown RBP17.64■□□□□ 0.42
KRT28-201ENST00000306658 RUNX3Q13761 415 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 GRM3Q14832 879 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 MYLK3Q32MK0 819 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 TUBB8Q3ZCM7 444 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 CARD16Q5EG05 197 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 TEDDM1Q5T9Z0 273 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 GRAMD4Q6IC98 578 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 PARM1Q6UWI2 310 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 MTSS1LQ765P7 747 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 C12orf40Q86WS4 652 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 PLPP6Q8IY26 295 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 MICALL1Q8N3F8 863 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 TUBGCP5Q96RT8 1024 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 SMC6Q96SB8 1091 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 GAS2L1Q99501 681 aaPredicted RBP17.64■□□□□ 0.42
KRT28-201ENST00000306658 KXD1Q9BQD3 176 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 SELENOSQ9BQE4 189 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 PLA2G2FQ9BZM2 168 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 TRABDQ9H4I3 376 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 IL1RAPL1Q9NZN1 696 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 RIMKLBQ9ULI2 386 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 RPL26L1Q9UNX3 145 aaKnown RBP17.64■□□□□ 0.42
KRT28-201ENST00000306658 PCDHB9Q9Y5E1 797 aa17.64■□□□□ 0.42
KRT28-201ENST00000306658 OTOL1A6NHN0 477 aaPredicted RBP17.64■□□□□ 0.41
KRT28-201ENST00000306658 TIMM44O43615 452 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms