RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 PPARDQ03181 441 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 GRM2Q14416 872 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 ACCSLQ4AC99 568 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 HSP90AA5PQ58FG0 334 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 DGKKQ5KSL6 1271 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 PDPK2PQ6A1A2 396 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 ESRP1Q6NXG1 681 aaKnown RBP13.09□□□□□ -0.31
CCDC7-202ENST00000302316 KIAA0907Q7Z7F0 614 aaPredicted RBP13.09□□□□□ -0.31
CCDC7-202ENST00000302316 MFSD6LQ8IWD5 586 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 HOMEZQ8IX15 550 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 KXD1Q9BQD3 176 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 ADGRE3Q9BY15 652 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 ECT2Q9H8V3 914 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 SENP1Q9P0U3 644 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 SLC2A6Q9UGQ3 507 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 FBXO10Q9UK96 956 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 BNIP3LO60238 219 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 ZNF821O75541 412 aaPredicted RBP13.09□□□□□ -0.31
CCDC7-202ENST00000302316 KRT37O76014 449 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 PRLP01236 227 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 PDHA1P08559 390 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 PIRTP0C851 137 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 LAMP2P13473 410 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 LTBRP36941 435 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 CSNK1DP48730 415 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 SNRPD1P62314 119 aaKnown RBP13.09□□□□□ -0.31
CCDC7-202ENST00000302316 FCHO2Q0JRZ9 810 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 MSLNQ13421 630 aaPredicted RBP13.09□□□□□ -0.31
CCDC7-202ENST00000302316 TSTD2Q5T7W7 516 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 TMEM215Q68D42 235 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 OR2AP1Q8NGE2 309 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 MSLNLQ96KJ4 702 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 CIPCQ9C0C6 399 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 CEP44Q9C0F1 390 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 TRABDQ9H4I3 376 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 HPS4Q9NQG7 708 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 TREX1Q9NSU2 369 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCDC7-202ENST00000302316 TXNDC16Q9P2K2 825 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 ACTL7BQ9Y614 415 aa13.09□□□□□ -0.31
CCDC7-202ENST00000302316 KIF26AQ9ULI4 1882 aaPredicted RBP13.08□□□□□ -0.31
CCDC7-202ENST00000302316 DOCK8Q8NF50 2099 aa13.08□□□□□ -0.31
CCDC7-202ENST00000302316 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.08□□□□□ -0.32
CCDC7-202ENST00000302316 OTOL1A6NHN0 477 aaPredicted RBP13.08□□□□□ -0.32
CCDC7-202ENST00000302316 GOLGA8TH3BQL2 631 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 KRT38O76015 456 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 VAPBO95292 243 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 PIGNO95427 931 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 BRAFP15056 766 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 CREB1P16220 341 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 SERPINB9P50453 376 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 BCL2L1Q07817 233 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 CNGA3Q16281 694 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 LGSNQ5TDP6 509 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 KIAA0930Q6ICG6 404 aaPredicted RBP13.08□□□□□ -0.32
CCDC7-202ENST00000302316 PACS1Q6VY07 963 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 ETFBKMTQ8IXQ9 262 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 CPA6Q8N4T0 437 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 PCDH20Q8N6Y1 951 aaKnown RBP13.08□□□□□ -0.32
CCDC7-202ENST00000302316 WFIKKN2Q8TEU8 576 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 MZB1Q8WU39 189 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 CYB5D2Q8WUJ1 264 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 MYLIPQ8WY64 445 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 ISG20Q96AZ6 181 aaKnown RBP13.08□□□□□ -0.32
CCDC7-202ENST00000302316 ELSPBP1Q96BH3 223 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 MYO19Q96H55 970 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 PLA2G2FQ9BZM2 168 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 ATP13A3Q9H7F0 1226 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 CNOT10Q9H9A5 744 aaKnown RBP13.08□□□□□ -0.32
CCDC7-202ENST00000302316 IARS2Q9NSE4 1012 aaKnown RBP13.08□□□□□ -0.32
CCDC7-202ENST00000302316 SLCO3A1Q9UIG8 710 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 ERVW-1Q9UQF0 538 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 SLC27A6Q9Y2P4 619 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 XIRP2A4UGR9 3374 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 DENND4AQ7Z401 1863 aa13.08□□□□□ -0.32
CCDC7-202ENST00000302316 A0A1W2PPM1 405 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 PAPSS2O95340 614 aaPredicted RBP13.07□□□□□ -0.32
CCDC7-202ENST00000302316 GSRP00390 522 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 SNRPAP09012 282 aaKnown RBP13.07□□□□□ -0.32
CCDC7-202ENST00000302316 CISD3P0C7P0 127 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 PSMC3P17980 439 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 GKP32189 559 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 EPHB1P54762 984 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 LAMB3Q13751 1172 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 BMPR2Q13873 1038 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 DLG2Q15700 870 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 EMC10Q5UCC4 262 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 GRAMD4Q6IC98 578 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 PARM1Q6UWI2 310 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 NLRP9Q7RTR0 991 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 CAMK1DQ8IU85 385 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 C4orf33Q8N1A6 199 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 PAF1Q8N7H5 531 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 SORCS1Q8WY21 1168 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 FGF14Q92915 247 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 SMC6Q96SB8 1091 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 AGAP2Q99490 1192 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 CPNE1Q99829 537 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 DEC1Q9P2X7 70 aa13.07□□□□□ -0.32
CCDC7-202ENST00000302316 COLQQ9Y215 455 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms