RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 AP1G1O43747 822 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 MMP20O60882 483 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 F9P00740 461 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 UGT2B4P06133 528 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 MMEP08473 750 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 CYP11B1P15538 503 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 IGFALSP35858 605 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 SNX16P57768 344 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 RHDQ02161 417 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 SLC20A2Q08357 652 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 VAC14Q08AM6 782 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 RAPGEF1Q13905 1077 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 NR0B2Q15466 257 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 CDO1Q16878 200 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 PRRT3Q5FWE3 981 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 MIIPQ5JXC2 388 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 RNFT1Q5M7Z0 435 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 RETSATQ6NUM9 610 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 ZCCHC8Q6NZY4 707 aaKnown RBP9.42□□□□□ -0.9
CNOT9-202ENST00000295701 NOP9Q86U38 636 aaKnown RBP9.42□□□□□ -0.9
CNOT9-202ENST00000295701 VPS36Q86VN1 386 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 PARGQ86W56 976 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 ARHGEF2Q92974 986 aaKnown RBP9.42□□□□□ -0.9
CNOT9-202ENST00000295701 COL26A1Q96A83 441 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 CENPTQ96BT3 561 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 KLHL32Q96NJ5 620 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 ZYG11BQ9C0D3 744 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 KLC2Q9H0B6 622 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 METTL5Q9NRN9 209 aaKnown RBP9.42□□□□□ -0.9
CNOT9-202ENST00000295701 SALL4Q9UJQ4 1053 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 COQ6Q9Y2Z9 468 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 PCDHB11Q9Y5F2 797 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 CSNK1G3Q9Y6M4 447 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 LRP4O75096 1905 aa9.42□□□□□ -0.9
CNOT9-202ENST00000295701 CDRT15L2A8MXV6 281 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 J3QKU1 62 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 AGRPO00253 132 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 KRIT1O00522 736 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 NEMP1O14524 444 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 YY2O15391 372 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 INSIG1O15503 277 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 EFSO43281 561 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 LZTS3O60299 673 aaPredicted RBP9.41□□□□□ -0.9
CNOT9-202ENST00000295701 RBMS1P29558 406 aaKnown RBP9.41□□□□□ -0.9
CNOT9-202ENST00000295701 PDX1P52945 283 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 NOMO3P69849 1222 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 SRSF6Q13247 344 aaKnown RBP9.41□□□□□ -0.9
CNOT9-202ENST00000295701 MAN2A1Q16706 1144 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 MYLK3Q32MK0 819 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 VWA3BQ502W6 1294 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 ZNF805Q5CZA5 627 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 FAXCQ5TGI0 409 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 MANEALQ5VSG8 457 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 KLHDC7AQ5VTJ3 777 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 NAA35Q5VZE5 725 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 RWDD4Q6NW29 188 aaKnown RBP9.41□□□□□ -0.9
CNOT9-202ENST00000295701 ZNF783Q6ZMS7 281 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 RBM44Q6ZP01 1051 aaKnown RBP9.41□□□□□ -0.9
CNOT9-202ENST00000295701 B3GNT8Q7Z7M8 397 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 NLRP14Q86W24 1093 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 PHACTR4Q8IZ21 702 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 JOSD2Q8TAC2 188 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 SLC20A1Q8WUM9 679 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 RXFP2Q8WXD0 754 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 IL12RB2Q99665 862 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 CCDC3Q9BQI4 270 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 LRRC61Q9BV99 259 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 BOCQ9BWV1 1114 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 NAA15Q9BXJ9 866 aaKnown RBP9.41□□□□□ -0.9
CNOT9-202ENST00000295701 DPH1Q9BZG8 443 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 NDST4Q9H3R1 872 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 SYNDIG1Q9H7V2 258 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 USP29Q9HBJ7 922 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 THSD1Q9NS62 852 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 PPARGC1AQ9UBK2 798 aaKnown RBP9.41□□□□□ -0.9
CNOT9-202ENST00000295701 OR12D3Q9UGF7 316 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 APOBEC3BQ9UH17 382 aaKnown RBP9.41□□□□□ -0.9
CNOT9-202ENST00000295701 NEU3Q9UQ49 428 aa9.41□□□□□ -0.9
CNOT9-202ENST00000295701 K7ENP7 123 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 TPP1O14773 563 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 AREL1O15033 823 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 TSPAN6O43657 245 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 TNFSF15O95150 251 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 TSHRP16473 764 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 RHOQP17081 205 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 CHRNB2P17787 502 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 GPC1P35052 558 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 ADRA1BP35368 520 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 SCNN1AP37088 669 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 EIF4A3P38919 411 aaKnown RBP9.4□□□□□ -0.9
CNOT9-202ENST00000295701 SCTRP47872 440 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 BPIFB4P59827 614 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 CLN3Q13286 438 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 TPD52L1Q16890 204 aaPredicted RBP9.4□□□□□ -0.9
CNOT9-202ENST00000295701 KLHL40Q2TBA0 621 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 ZSCAN23Q3MJ62 389 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 CCDC14Q49A88 953 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 KCTD16Q68DU8 428 aa9.4□□□□□ -0.9
CNOT9-202ENST00000295701 INO80CQ6PI98 192 aaPredicted RBP9.4□□□□□ -0.9
CNOT9-202ENST00000295701 TTC7BQ86TV6 843 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms