RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 SLC25A25Q6KCM7 469 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 TAS1R3Q7RTX0 852 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 C1orf216Q8TAB5 229 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 ARNTL2Q8WYA1 636 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 TMEM176AQ96HP8 235 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 IL12RB2Q99665 862 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 TKTL2Q9H0I9 626 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 NMRAL1Q9HBL8 299 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 PNPLA8Q9NP80 782 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 FBXW2Q9UKT8 454 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 MYOM2P54296 1465 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 H3BSH0 61 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 KPNA4O00629 521 aaPredicted RBP12.51□□□□□ -0.41
SLX4-201ENST00000294008 RIPK2O43353 540 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 RRM1P23921 792 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 ASMTP46597 345 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 PPP3R1P63098 170 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 MED22Q15528 200 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 DENND5AQ6IQ26 1287 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 PRMT9Q6P2P2 845 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 ELAC1Q9H777 363 aaKnown RBP12.51□□□□□ -0.41
SLX4-201ENST00000294008 PNO1Q9NRX1 252 aaKnown RBP12.51□□□□□ -0.41
SLX4-201ENST00000294008 ZSCAN5CA6NGD5 496 aaPredicted RBP12.51□□□□□ -0.41
SLX4-201ENST00000294008 L7N2F9 121 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 TULP3O75386 442 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 CCND1P24385 295 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 TUFMP49411 452 aaKnown RBP12.51□□□□□ -0.41
SLX4-201ENST00000294008 VAMP2P63027 116 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 RPL19P84098 196 aaKnown RBP12.51□□□□□ -0.41
SLX4-201ENST00000294008 PRKG2Q13237 762 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 ALG10Q5BKT4 473 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 FAM46CQ5VWP2 391 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 SLC41A1Q8IVJ1 513 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 EFHD2Q96C19 240 aaPredicted RBP12.51□□□□□ -0.41
SLX4-201ENST00000294008 ZSCAN5AQ9BUG6 496 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.51□□□□□ -0.41
SLX4-201ENST00000294008 WHRNQ9P202 907 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 GSC2O15499 205 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 USP12O75317 370 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 YBX3P16989 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
SLX4-201ENST00000294008 AMPD1P23109 780 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 TXNL4AP83876 142 aaKnown RBP12.51□□□□□ -0.41
SLX4-201ENST00000294008 FAM187BQ17R55 369 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 N4BP2L1Q5TBK1 243 aaPredicted RBP12.51□□□□□ -0.41
SLX4-201ENST00000294008 SDHAF4Q5VUM1 108 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 ZCCHC12Q6PEW1 402 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 BHLHB9Q6PI77 547 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 OR8D1Q8WZ84 308 aa12.51□□□□□ -0.41
SLX4-201ENST00000294008 PRCCQ92733 491 aaPredicted RBP12.51□□□□□ -0.41
SLX4-201ENST00000294008 CCDC86Q9H6F5 360 aaKnown RBP12.51□□□□□ -0.41
SLX4-201ENST00000294008 NT5C1B-RDH14C9J2C7 533 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 LOC110117498-PIK3R3F6TDL0 507 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 CPNE6O95741 557 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 LINGO3P0C6S8 592 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 ELFN1P0C7U0 828 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 CD86P42081 329 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 MAGEA12P43365 314 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 SCN1BQ07699 218 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 PDK2Q15119 407 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 FSTL5Q8N475 847 aaPredicted RBP12.5□□□□□ -0.41
SLX4-201ENST00000294008 PIK3R3Q92569 461 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 ALG9Q9H6U8 611 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 TMPRSS4Q9NRS4 437 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 TBC1D30Q9Y2I9 924 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 WASHC1A8K0Z3 465 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 WASH3PC4AMC7 463 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 HAT1O14929 419 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 AP2S1P53680 142 aaPredicted RBP12.5□□□□□ -0.41
SLX4-201ENST00000294008 SLC20A2Q08357 652 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 NAB1Q13506 487 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 TMEM164Q5U3C3 297 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 WASH2PQ6VEQ5 465 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 SSX6Q7RTT6 188 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 PTPN18Q99952 460 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 FSHRP23945 695 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 CCKBRP32239 447 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 ZNF543Q08ER8 600 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 PRAMEF19Q5SWL8 479 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 WDR93Q6P2C0 686 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 TTC29Q8NA56 475 aaPredicted RBP12.5□□□□□ -0.41
SLX4-201ENST00000294008 USP38Q8NB14 1042 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 STARD8Q92502 1023 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 BORCS8Q96FH0 119 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 SAMD4AQ9UPU9 718 aaKnown RBP12.5□□□□□ -0.41
SLX4-201ENST00000294008 ZNF730Q6ZMV8 503 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 SCUBE3Q8IX30 993 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 PNPT1Q8TCS8 783 aaKnown RBP12.5□□□□□ -0.41
SLX4-201ENST00000294008 ING4Q9UNL4 249 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 BTRCQ9Y297 605 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 FAM227AF5H4B4 570 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 PIRTP0C851 137 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 SP3Q02447 781 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 BMT2Q1RMZ1 405 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 LRRC69Q6ZNQ3 347 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 C16orf86Q6ZW13 317 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 C12orf56Q8IXR9 622 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 ZMIZ2Q8NF64 920 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 SNX33Q8WV41 574 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 FZD1Q9UP38 647 aa12.5□□□□□ -0.41
SLX4-201ENST00000294008 TFR2Q9UP52 801 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms