RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 PIGGQ5H8A4 983 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 TECRLQ5HYJ1 363 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 TTC9BQ8N6N2 239 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 PDCD6IPQ8WUM4 868 aaKnown RBP20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 ANKRD49Q8WVL7 239 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 PSMG2Q969U7 264 aa20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 PRPF19Q9UMS4 504 aaKnown RBP20.1■□□□□ 0.81
SCUBE1-201ENST00000290460 HEATR9A2RTY3 570 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 OR51F1A6NGY5 319 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 MMP2P08253 660 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 CCDC166P0CW27 439 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 MRPS22P82650 360 aaKnown RBP20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 MS4A2Q01362 244 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 SULT2A1Q06520 285 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 EFEMP1Q12805 493 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 MS4A13Q5J8X5 152 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 PIWIL4Q7Z3Z4 852 aaKnown RBP20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 SH3RF2Q8TEC5 729 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 PHF21BQ96EK2 531 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 UROC1Q96N76 676 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 WDR41Q9HAD4 459 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 ZDHHC7Q9NXF8 308 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 GMIPQ9P107 970 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 TLR6Q9Y2C9 796 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 A8MT66 165 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 ADAMTS4O75173 837 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 ARSDP51689 593 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 TBX4P57082 545 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 FLOT2Q14254 428 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 FAM83EQ2M2I3 478 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 ZNF598Q86UK7 904 aaKnown RBP20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 CIR1Q86X95 450 aaPredicted RBP20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 ZNF683Q8IZ20 524 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 TMA16Q96EY4 203 aaKnown RBP20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 SLC39A13Q96H72 371 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 PPP1R2P1Q96PQ5 205 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 SERPINI1Q99574 410 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 UPF3AQ9H1J1 476 aaKnown RBP20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 PCDHB8Q9UN66 801 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 PRG3Q9Y2Y8 225 aaPredicted RBP20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 KCTD3Q9Y597 815 aa20.09■□□□□ 0.81
SCUBE1-201ENST00000290460 TCAF2A6NFQ2 919 aa20.08■□□□□ 0.81
SCUBE1-201ENST00000290460 SOAT2O75908 522 aa20.08■□□□□ 0.81
SCUBE1-201ENST00000290460 ETFBP38117 255 aa20.08■□□□□ 0.81
SCUBE1-201ENST00000290460 RENBPP51606 427 aa20.08■□□□□ 0.81
SCUBE1-201ENST00000290460 MARC1Q5VT66 337 aa20.08■□□□□ 0.81
SCUBE1-201ENST00000290460 GK5Q6ZS86 529 aa20.08■□□□□ 0.81
SCUBE1-201ENST00000290460 UMODL1-AS1Q8N2C9 162 aa20.08■□□□□ 0.81
SCUBE1-201ENST00000290460 OR6P1Q8NGX9 317 aa20.08■□□□□ 0.81
SCUBE1-201ENST00000290460 MAELQ96JY0 434 aaKnown RBP20.08■□□□□ 0.81
SCUBE1-201ENST00000290460 SP110Q9HB58 689 aa20.08■□□□□ 0.81
SCUBE1-201ENST00000290460 ARNT2Q9HBZ2 717 aa20.08■□□□□ 0.81
SCUBE1-201ENST00000290460 ATP13A1Q9HD20 1204 aa20.08■□□□□ 0.81
SCUBE1-201ENST00000290460 PRDM5Q9NQX1 630 aaPredicted RBP20.08■□□□□ 0.81
SCUBE1-201ENST00000290460 VWA8A3KMH1 1905 aa20.08■□□□□ 0.8
SCUBE1-201ENST00000290460 PLXNA3P51805 1871 aa20.08■□□□□ 0.8
SCUBE1-201ENST00000290460 SLC22A2O15244 555 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 UQCRBP14927 111 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 TCN1P20061 433 aaPredicted RBP20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 LEPRP48357 1165 aaKnown RBP20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 C1QTNF8P60827 252 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 ART3Q13508 389 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 NAIF1Q69YI7 327 aaPredicted RBP20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 KIAA0408Q6ZU52 694 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 MON1AQ86VX9 555 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 MIB1Q86YT6 1006 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 PGAM4Q8N0Y7 254 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 NUP93Q8N1F7 819 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 SNX31Q8N9S9 440 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 FAM156AQ8NDB6 213 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 IGSF8Q969P0 613 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 C1orf74Q96LT6 269 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 TSC22D3Q99576 134 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 ZYG11BQ9C0D3 744 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 VCX3BQ9H321 246 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 MARCH4Q9P2E8 410 aaPredicted RBP20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 SCML2Q9UQR0 700 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 CAPN8A6NHC0 703 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 WASH4PA8MWX3 477 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 CASQ2O14958 399 aaPredicted RBP20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 HMBSP08397 361 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 DNAJB13P59910 316 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 NRG1Q02297 640 aaPredicted RBP20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 PPP1R3AQ16821 1122 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 HECTD2Q5U5R9 776 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 SETD3Q86TU7 594 aaPredicted RBP20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 PIM3Q86V86 326 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 CILP2Q8IUL8 1156 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 PQLC1Q8N2U9 271 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 HDAC10Q969S8 669 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 PDP2Q9P2J9 529 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 NOD1Q9Y239 953 aa20.07■□□□□ 0.8
SCUBE1-201ENST00000290460 TRPC5OSA6NMA1 111 aa20.06■□□□□ 0.8
SCUBE1-201ENST00000290460 IPO13O94829 963 aaKnown RBP20.06■□□□□ 0.8
SCUBE1-201ENST00000290460 LTA4HP09960 611 aaKnown RBP20.06■□□□□ 0.8
SCUBE1-201ENST00000290460 VCLP18206 1134 aa20.06■□□□□ 0.8
SCUBE1-201ENST00000290460 TSPAN8P19075 237 aa20.06■□□□□ 0.8
SCUBE1-201ENST00000290460 ALDH1A3P47895 512 aa20.06■□□□□ 0.8
SCUBE1-201ENST00000290460 KPNA2P52292 529 aaKnown RBP20.06■□□□□ 0.8
SCUBE1-201ENST00000290460 CDKN2DP55273 166 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms