RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 DFFAO00273 331 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 DLGAP1O14490 977 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 INPP4BO15327 924 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 ZNF286BP0CG31 522 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 TXNP10599 105 aaKnown RBP13.01□□□□□ -0.33
COL8A1-202ENST00000273342 CYP2B6P20813 491 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 IGFBP6P24592 240 aaPredicted RBP13.01□□□□□ -0.33
COL8A1-202ENST00000273342 HMOX2P30519 316 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 CHRNA4P43681 627 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 APLP1P51693 650 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 BMXP51813 675 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 OAZ1P54368 228 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 MERTKQ12866 999 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 PCSK7Q16549 785 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 SLC25A52Q3SY17 297 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 CUZD1Q86UP6 607 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 ANKRD52Q8NB46 1076 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 GFM2Q969S9 779 aaKnown RBP13.01□□□□□ -0.33
COL8A1-202ENST00000273342 COX4I2Q96KJ9 171 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 C3orf30Q96M34 536 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 SIK2Q9H0K1 926 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 ADAMTS5Q9UNA0 930 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 SQORQ9Y6N5 450 aa13.01□□□□□ -0.33
COL8A1-202ENST00000273342 TCRBV3S1A0A5B6 114 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 APOA4P06727 396 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 MAP4P27816 1152 aaKnown RBP13□□□□□ -0.33
COL8A1-202ENST00000273342 BCAT1P54687 386 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 RFTN1Q14699 578 aaPredicted RBP13□□□□□ -0.33
COL8A1-202ENST00000273342 HERC3Q15034 1050 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 OTUD1Q5VV17 481 aaPredicted RBP13□□□□□ -0.33
COL8A1-202ENST00000273342 RWDD4Q6NW29 188 aaKnown RBP13□□□□□ -0.33
COL8A1-202ENST00000273342 NCCRP1Q6ZVX7 275 aaPredicted RBP13□□□□□ -0.33
COL8A1-202ENST00000273342 CROCCP3Q8IVE0 287 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 OR2T34Q8NGX1 318 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 OR2T3Q8NH03 318 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 DNAJB14Q8TBM8 379 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 KCNN1Q92952 543 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 YIPF2Q9BWQ6 316 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 FAM49AQ9H0Q0 323 aaPredicted RBP13□□□□□ -0.33
COL8A1-202ENST00000273342 MRPL46Q9H2W6 279 aaKnown RBP13□□□□□ -0.33
COL8A1-202ENST00000273342 HIPK3Q9H422 1215 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 CNOT11Q9UKZ1 510 aaKnown RBP13□□□□□ -0.33
COL8A1-202ENST00000273342 RBMX2Q9Y388 322 aaKnown RBP13□□□□□ -0.33
COL8A1-202ENST00000273342 DGKBQ9Y6T7 804 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 THSD7AQ9UPZ6 1657 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 DHRS12A0PJE2 317 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 TARM1B6A8C7 271 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 SLCO1B7G3V0H7 640 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 NME4O00746 187 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 SPTLC1O15269 473 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 BMP10O95393 424 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 SLC1A2P43004 574 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 TNFAIP2Q03169 654 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 NR1D2Q14995 579 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 CYP2A13Q16696 494 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 PPP4R4Q6NUP7 873 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 CMTR2Q8IYT2 770 aaKnown RBP13□□□□□ -0.33
COL8A1-202ENST00000273342 TBC1D15Q8TC07 691 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 TRPM4Q8TD43 1214 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 SGCDQ92629 289 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 GPR78Q96P69 363 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 EIF2AQ9BY44 585 aaKnown RBP13□□□□□ -0.33
COL8A1-202ENST00000273342 VRTNQ9H8Y1 702 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 ZFYVE28Q9HCC9 887 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 USP22Q9UPT9 525 aa13□□□□□ -0.33
COL8A1-202ENST00000273342 LRRC14BA6NHZ5 514 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 SNAP29O95721 258 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 PORP16435 677 aaPredicted RBP12.99□□□□□ -0.33
COL8A1-202ENST00000273342 BDNFP23560 247 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 ELK4P28324 431 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 MAP3K7CLP57077 242 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 PFKPQ01813 784 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 CYP51A1Q16850 503 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 HABP4Q5JVS0 413 aaKnown RBP12.99□□□□□ -0.33
COL8A1-202ENST00000273342 SAMD4BQ5PRF9 694 aaKnown RBP12.99□□□□□ -0.33
COL8A1-202ENST00000273342 EGFLAMQ63HQ2 1017 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 GALNT18Q6P9A2 607 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 DCDC5Q6ZRR9 648 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 SIX6OS1Q8N1H7 587 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 PELI3Q8N2H9 469 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 SLC15A4Q8N697 577 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 HM13Q8TCT9 377 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 ZBED3Q96IU2 234 aaPredicted RBP12.99□□□□□ -0.33
COL8A1-202ENST00000273342 GPATCH1Q9BRR8 931 aaKnown RBP12.99□□□□□ -0.33
COL8A1-202ENST00000273342 SNX25Q9H3E2 840 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 LRRC4Q9HBW1 653 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 PIM2Q9P1W9 311 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 EVLQ9UI08 416 aaPredicted RBP12.99□□□□□ -0.33
COL8A1-202ENST00000273342 FADS3Q9Y5Q0 445 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 C22orf31O95567 290 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 CAPNS1P04632 268 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 HSPA8P11142 646 aaKnown RBP12.99□□□□□ -0.33
COL8A1-202ENST00000273342 SNX16P57768 344 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 PHEXP78562 749 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 PLIN5Q00G26 463 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 PIGFQ07326 219 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 TNK2Q07912 1038 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 CELF3Q5SZQ8 465 aaKnown RBP12.99□□□□□ -0.33
COL8A1-202ENST00000273342 STRADAQ7RTN6 431 aa12.99□□□□□ -0.33
COL8A1-202ENST00000273342 PARP8Q8N3A8 854 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms