RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 ISLR2Q6UXK2 745 aa12.78□□□□□ -0.36
PRPF6-201ENST00000266079 SLC22A12Q96S37 553 aa12.78□□□□□ -0.36
PRPF6-201ENST00000266079 WDCPQ9H6R7 721 aa12.78□□□□□ -0.36
PRPF6-201ENST00000266079 GKN1Q9NS71 199 aa12.78□□□□□ -0.36
PRPF6-201ENST00000266079 FAIMQ9NVQ4 179 aa12.78□□□□□ -0.36
PRPF6-201ENST00000266079 FBXW11Q9UKB1 542 aa12.78□□□□□ -0.36
PRPF6-201ENST00000266079 PCDHGB4Q9UN71 923 aa12.78□□□□□ -0.36
PRPF6-201ENST00000266079 PCDHGB5Q9Y5G0 923 aa12.78□□□□□ -0.36
PRPF6-201ENST00000266079 MYO16Q9Y6X6 1858 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 TRIOO75962 3097 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 SLC12A8A0AV02 714 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 DPYSL4O14531 572 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 CLASP2O75122 1294 aaKnown RBP12.77□□□□□ -0.36
PRPF6-201ENST00000266079 KRT37O76014 449 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 CRTAMO95727 393 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 SRGAP2BP0DMP2 458 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 VARSP26640 1264 aaKnown RBP12.77□□□□□ -0.36
PRPF6-201ENST00000266079 COG7P83436 770 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 OTUD4Q01804 1114 aaKnown RBP12.77□□□□□ -0.36
PRPF6-201ENST00000266079 MPP3Q13368 585 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 SLC44A4Q53GD3 710 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 LRRC8BQ6P9F7 803 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 HPS6Q86YV9 775 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 PQLC1Q8N2U9 271 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 ACTL9Q8TC94 416 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 RSAD2Q8WXG1 361 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 HSPBAP1Q96EW2 488 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 SIKE1Q9BRV8 207 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 MRPL1Q9BYD6 325 aaKnown RBP12.77□□□□□ -0.36
PRPF6-201ENST00000266079 SMG9Q9H0W8 520 aaKnown RBP12.77□□□□□ -0.36
PRPF6-201ENST00000266079 DDX56Q9NY93 547 aaKnown RBP12.77□□□□□ -0.36
PRPF6-201ENST00000266079 TRPM5Q9NZQ8 1165 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 MARCH2Q9P0N8 246 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 C6orf203Q9P0P8 240 aaPredicted RBP12.77□□□□□ -0.36
PRPF6-201ENST00000266079 IRAK3Q9Y616 596 aa12.77□□□□□ -0.36
PRPF6-201ENST00000266079 FAM72CH0Y354 149 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 SPAG6O75602 509 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 KRT7P08729 469 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 SCNN1AP37088 669 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 NR1H2P55055 460 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 PHEXP78562 749 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 STX3Q13277 289 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 ADRM1Q16186 407 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 CNGA3Q16281 694 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 TCHHL1Q5QJ38 904 aaPredicted RBP12.77□□□□□ -0.37
PRPF6-201ENST00000266079 FAM72AQ5TYM5 149 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 FAM72DQ6L9T8 149 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 FAM72BQ86X60 149 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 SLC13A1Q9BZW2 595 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 ATXN3LQ9H3M9 355 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 PRDM12Q9H4Q4 367 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 WDR6Q9NNW5 1121 aaKnown RBP12.77□□□□□ -0.37
PRPF6-201ENST00000266079 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.77□□□□□ -0.372e-7■□□□□ 10.7
PRPF6-201ENST00000266079 MKS1Q9NXB0 559 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 PSMD13Q9UNM6 376 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 AP4B1Q9Y6B7 739 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 AK5Q9Y6K8 562 aa12.77□□□□□ -0.37
PRPF6-201ENST00000266079 ZNF840PA6NDX5 716 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 E9PBE3 544 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 H3BSA7 217 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 BPGMP07738 259 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 KDELR1P24390 212 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 KCNQ1P51787 676 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 CREMQ03060 361 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 RFX6Q8HWS3 928 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 WDR75Q8IWA0 830 aaKnown RBP12.76□□□□□ -0.37
PRPF6-201ENST00000266079 BBS5Q8N3I7 341 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 FBXW8Q8N3Y1 598 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 CENPIQ92674 756 aaPredicted RBP12.76□□□□□ -0.37
PRPF6-201ENST00000266079 TCEAL4Q96EI5 215 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 PRPF18Q99633 342 aaKnown RBP12.76□□□□□ -0.37
PRPF6-201ENST00000266079 RNF38Q9H0F5 515 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 THAP1Q9NVV9 213 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 ARHGEF38Q9NXL2 777 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 APPL1Q9UKG1 709 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 MFHAS1Q9Y4C4 1052 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 TEX264Q9Y6I9 313 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 CEPT1Q9Y6K0 416 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 BIRC5O15392 142 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 GOT1P17174 413 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 L1CAMP32004 1257 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 UBE3AQ05086 875 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 IYDQ6PHW0 289 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 GAREM2Q75VX8 874 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 STRADAQ7RTN6 431 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 DEFB107AQ8IZN7 70 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 PPM1NQ8N819 430 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 ING5Q8WYH8 240 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 NT5C3BQ969T7 300 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 PSMG2Q969U7 264 aa12.76□□□□□ -0.37
PRPF6-201ENST00000266079 KCTD15Q96SI1 283 aaPredicted RBP12.76□□□□□ -0.37
PRPF6-201ENST00000266079 STN1Q9H668 368 aaKnown RBP12.76□□□□□ -0.37
PRPF6-201ENST00000266079 XAB2Q9HCS7 855 aaKnown RBP12.76□□□□□ -0.37
PRPF6-201ENST00000266079 APOBEC2Q9Y235 224 aaKnown RBP12.76□□□□□ -0.37
PRPF6-201ENST00000266079 IRAK2O43187 625 aa12.75□□□□□ -0.37
PRPF6-201ENST00000266079 RFPL1O75677 317 aa12.75□□□□□ -0.37
PRPF6-201ENST00000266079 C1QAP02745 245 aa12.75□□□□□ -0.37
PRPF6-201ENST00000266079 CDH2P19022 906 aaPredicted RBP12.75□□□□□ -0.37
PRPF6-201ENST00000266079 ITGAXP20702 1163 aa12.75□□□□□ -0.37
PRPF6-201ENST00000266079 CCR2P41597 374 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms