RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.3□□□□□ -0.12
SDF2-201ENST00000247020 HACD3Q9P035 362 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 RPL26L1Q9UNX3 145 aaKnown RBP14.3□□□□□ -0.12
SDF2-201ENST00000247020 TRANK1O15050 2925 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 DENND4AQ7Z401 1863 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 KIAA1549LQ6ZVL6 1849 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 TTC24A2A3L6 582 aaPredicted RBP14.3□□□□□ -0.12
SDF2-201ENST00000247020 HMX2A2RU54 273 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 FOXO6A8MYZ6 492 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 HOXC11O43248 304 aaPredicted RBP14.3□□□□□ -0.12
SDF2-201ENST00000247020 LDB2O43679 373 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 FZD6O60353 706 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 ASMTLO95671 621 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 GLP2RO95838 553 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 ADH1CP00326 375 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 GSRP00390 522 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 PSMA3P25788 255 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 HYAL1Q12794 435 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 THOC5Q13769 683 aaKnown RBP14.3□□□□□ -0.12
SDF2-201ENST00000247020 MPP2Q14168 576 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 CBX2Q14781 532 aaPredicted RBP14.3□□□□□ -0.12
SDF2-201ENST00000247020 GRM3Q14832 879 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 CNGA3Q16281 694 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 STRA8Q7Z7C7 330 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 PLPP6Q8IY26 295 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 BPIFB1Q8TDL5 484 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 WFIKKN2Q8TEU8 576 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 CKAP2Q8WWK9 683 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 EXOC2Q96KP1 924 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 LINC00597Q9H2U6 94 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 MFSD1Q9H3U5 465 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 IARS2Q9NSE4 1012 aaKnown RBP14.3□□□□□ -0.12
SDF2-201ENST00000247020 DUS2Q9NX74 493 aaKnown RBP14.3□□□□□ -0.12
SDF2-201ENST00000247020 FCF1Q9Y324 198 aaKnown RBP14.3□□□□□ -0.12
SDF2-201ENST00000247020 PSAT1Q9Y617 370 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 WNT6Q9Y6F9 365 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 GMNCA6NCL1 334 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 COPEO14579 308 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 SPAG7O75391 227 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 GJB3O75712 270 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 VAPBO95292 243 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 NFATC1O95644 943 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 PRLP01236 227 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 PYGBP11216 843 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 SRCP12931 536 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 ARNTP27540 789 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 MAGEA12P43365 314 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 GRIA4P48058 902 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 NEK3P51956 506 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 SNRPD1P62314 119 aaKnown RBP14.29□□□□□ -0.12
SDF2-201ENST00000247020 DHCR24Q15392 516 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 TAF1AQ15573 450 aaPredicted RBP14.29□□□□□ -0.12
SDF2-201ENST00000247020 SEPT7Q16181 437 aaKnown RBP14.29□□□□□ -0.12
SDF2-201ENST00000247020 EML3Q32P44 896 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 FUT11Q495W5 492 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 MROH9Q5TGP6 573 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 TTC19Q6DKK2 380 aaPredicted RBP14.29□□□□□ -0.12
SDF2-201ENST00000247020 PCDH20Q8N6Y1 951 aaKnown RBP14.29□□□□□ -0.12
SDF2-201ENST00000247020 ANKRD42Q8N9B4 389 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 OR13J1Q8NGT2 312 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 FGF13Q92913 245 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 PTPRN2Q92932 1015 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 RMDN1Q96DB5 314 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 MAGEB18Q96M61 343 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 NSMCE3Q96MG7 304 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 TUBGCP5Q96RT8 1024 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 RHOJQ9H4E5 214 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 CHKBQ9Y259 395 aa14.29□□□□□ -0.12
SDF2-201ENST00000247020 LAMA2P24043 3122 aaKnown RBP14.28□□□□□ -0.12
SDF2-201ENST00000247020 ANKRD66B4E2M5 251 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 HTRA2O43464 458 aaPredicted RBP14.28□□□□□ -0.12
SDF2-201ENST00000247020 MT-CO1P00395 513 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 ASLP04424 464 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 CYP17A1P05093 508 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 ADH5P11766 374 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 RPA3P35244 121 aaPredicted RBP14.28□□□□□ -0.12
SDF2-201ENST00000247020 CCT5P48643 541 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 SERPINB8P50452 374 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 TRAF2Q12933 501 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 BMPR2Q13873 1038 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 GALNT3Q14435 633 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 INSCQ1MX18 579 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 FAM78AQ5JUQ0 283 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 SYCE2Q6PIF2 218 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 C2CD4AQ8NCU7 369 aaPredicted RBP14.28□□□□□ -0.12
SDF2-201ENST00000247020 OR2AP1Q8NGE2 309 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 ATP2A3Q93084 1043 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 CHMP6Q96FZ7 201 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 AGAP2Q99490 1192 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 GPR22Q99680 433 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 IQCGQ9H095 443 aaKnown RBP14.28□□□□□ -0.12
SDF2-201ENST00000247020 IGFLR1Q9H665 355 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 THG1LQ9NWX6 298 aaKnown RBP14.28□□□□□ -0.12
SDF2-201ENST00000247020 SLC27A6Q9Y2P4 619 aa14.28□□□□□ -0.12
SDF2-201ENST00000247020 ZNF106Q9H2Y7 1883 aaKnown RBP14.28□□□□□ -0.12
SDF2-201ENST00000247020 A0A1W2PQ67 120 aa14.27□□□□□ -0.12
SDF2-201ENST00000247020 C2orf81A6NN90 581 aa14.27□□□□□ -0.12
SDF2-201ENST00000247020 SMAD6O43541 496 aaKnown RBP14.27□□□□□ -0.12
SDF2-201ENST00000247020 RPP40O75818 363 aaKnown RBP14.27□□□□□ -0.12
SDF2-201ENST00000247020 FAM107AO95990 144 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms