RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 MTHFD2P13995 350 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 PRKCHP24723 683 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 SDC4P31431 198 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 ELK3P41970 407 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 ATP5OP48047 213 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 NR2C2P49116 596 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 RPL34P49207 117 aaKnown RBP8.06□□□□□ -1.12
CXCR4-201ENST00000241393 NEK3P51956 506 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 BCAR1P56945 870 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 PFKPQ01813 784 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 ALDH6A1Q02252 535 aaKnown RBP8.06□□□□□ -1.12
CXCR4-201ENST00000241393 GAD2Q05329 585 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 SNAPC2Q13487 334 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 R3HDM1Q15032 1099 aaKnown RBP8.06□□□□□ -1.12
CXCR4-201ENST00000241393 TAF5Q15542 800 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 GOLGA7BQ2TAP0 167 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 CCDC14Q49A88 953 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 LGSNQ5TDP6 509 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 PRAMEF9Q5VWM5 478 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 TRNP1Q6NT89 227 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 CYS1Q717R9 158 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 OTOAQ7RTW8 1153 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 SLC26A11Q86WA9 606 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 CILP2Q8IUL8 1156 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 ZNF276Q8N554 614 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 UBA3Q8TBC4 463 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 TCP10LQ8TDR4 215 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 SLC35F5Q8WV83 523 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 ERP27Q96DN0 273 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 CDCA5Q96FF9 252 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 CLMNQ96JQ2 1002 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 C16orf70Q9BSU1 422 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 BTBD2Q9BX70 525 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 MCOLN1Q9GZU1 580 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 R3HDMLQ9H3Y0 253 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 PDGFCQ9NRA1 345 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 HESX1Q9UBX0 185 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 GRID1Q9ULK0 1009 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 CHMP2BQ9UQN3 213 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 CHKBQ9Y259 395 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 RALGAPA2Q2PPJ7 1873 aa8.06□□□□□ -1.12
CXCR4-201ENST00000241393 MCM3APO60318 1980 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 RRN3P2A6NIE6 340 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 KBTBD13C9JR72 458 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 STRNO43815 780 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 GCATO75600 419 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 DDNO94850 711 aaPredicted RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 ZBED1O96006 694 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 C8BP07358 591 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 KRT16P08779 473 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 TPSB2P20231 275 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 IL4RP24394 825 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 MAP2K2P36507 400 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 ETV4P43268 484 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 ACADSBP45954 432 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 CDK18Q07002 472 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 SF3A3Q12874 501 aaKnown RBP eCLIP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 EFTUD2Q15029 972 aaKnown RBP eCLIP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 TPSAB1Q15661 275 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 ZBTB6Q15916 424 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 DPYSL2Q16555 572 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 MAMDC4Q6UXC1 1216 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 SH2D5Q6ZV89 423 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 USP50Q70EL3 339 aaPredicted RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 SLC26A9Q7LBE3 791 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 CXXC5Q7LFL8 322 aaKnown RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 CEP57Q86XR8 500 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 PSTKQ8IV42 348 aaKnown RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 PQLC3Q8N755 202 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 GPRC5AQ8NFJ5 357 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 BEST2Q8NFU1 509 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 FAM172AQ8WUF8 416 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 CENPIQ92674 756 aaPredicted RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 OPTNQ96CV9 577 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 MTBPQ96DY7 904 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 RAX2Q96IS3 184 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 CPB2Q96IY4 423 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 ZNF668Q96K58 619 aaPredicted RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 PPP1R16BQ96T49 567 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 MYLK2Q9H1R3 596 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 MANSC1Q9H8J5 431 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 SLCO1B3Q9NPD5 702 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 AASDHPPTQ9NRN7 309 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 RCOR3Q9P2K3 495 aaPredicted RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 KLHL42Q9P2K6 505 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 LNPEPQ9UIQ6 1025 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 CITO14578 2027 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 HACD1B0YJ81 288 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 E7ENQ6 273 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 KCNN4O15554 427 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 LPXNO60711 386 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 BANF1O75531 89 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 SNUPNO95149 360 aaKnown RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 C1QAP02745 245 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 VTNP04004 478 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 ATP5BP06576 529 aaKnown RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 SNRPAP09012 282 aaKnown RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 ADRA1DP25100 572 aa8.05□□□□□ -1.12
CXCR4-201ENST00000241393 APEX1P27695 318 aaKnown RBP8.05□□□□□ -1.12
CXCR4-201ENST00000241393 AXLP30530 894 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms