RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 RPL4P36578 427 aaKnown RBP11.62□□□□□ -0.55
LAMA4-201ENST00000230538 TNFSF9P41273 254 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 PSEN1P49768 467 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 GTF2BQ00403 316 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 TCEAL5Q5H9L2 206 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 APOBEC3HQ6NTF7 200 aaKnown RBP11.62□□□□□ -0.55
LAMA4-201ENST00000230538 GPC2Q8N158 579 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 SPATA6LQ8N4H0 392 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 RERGQ96A58 199 aaPredicted RBP11.62□□□□□ -0.55
LAMA4-201ENST00000230538 CORO1BQ9BR76 489 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 TRIM38O00635 465 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 LPIN1Q14693 890 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 KLHL12Q53G59 568 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 TTC23Q5W5X9 447 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 ABRAXAS1Q6UWZ7 409 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 APTXQ7Z2E3 356 aaKnown RBP11.62□□□□□ -0.55
LAMA4-201ENST00000230538 SAPCD2Q86UD0 394 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 ALYREFQ86V81 257 aaKnown RBP11.62□□□□□ -0.55
LAMA4-201ENST00000230538 CROCCP3Q8IVE0 287 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 PURBQ96QR8 312 aaKnown RBP11.62□□□□□ -0.55
LAMA4-201ENST00000230538 BTBD3Q9Y2F9 522 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 OR10H1Q9Y4A9 318 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 TRIM17Q9Y577 477 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 WWP2O00308 870 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 HDCP19113 662 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 TPP2P29144 1249 aaPredicted RBP11.62□□□□□ -0.55
LAMA4-201ENST00000230538 ADSSP30520 456 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 MARCKSL1P49006 195 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 FKBP1AP62942 108 aaKnown RBP11.62□□□□□ -0.55
LAMA4-201ENST00000230538 GALNT3Q14435 633 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 TXNDC11Q6PKC3 985 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 BTN2A1Q7KYR7 527 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 ZNF540Q8NDQ6 660 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 ACO2Q99798 780 aaKnown RBP11.62□□□□□ -0.55
LAMA4-201ENST00000230538 KCNMB3Q9NPA1 279 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 PTGFRNQ9P2B2 879 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 ACTL7BQ9Y614 415 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 PIAS1O75925 651 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 ABHD2P08910 425 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 MYBL2P10244 700 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 GOT1P17174 413 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 ABRQ12979 859 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 CNSTQ6PJW8 725 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 KIAA1324Q6UXG2 1013 aaKnown RBP11.62□□□□□ -0.55
LAMA4-201ENST00000230538 HIPK1Q86Z02 1210 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 COPS5Q92905 334 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 SEMA3CQ99985 751 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 MFSD1Q9H3U5 465 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 CMTM6Q9NX76 183 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 RIMS1Q86UR5 1692 aaKnown RBP11.62□□□□□ -0.55
LAMA4-201ENST00000230538 SLC25A12O75746 678 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 PSMD10O75832 226 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 CABYRO75952 493 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 OTCP00480 354 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 UGT2B15P54855 530 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 SMIM11AP58511 58 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 SPIBQ01892 262 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 VGLL4Q14135 290 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 ARCQ7LC44 396 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 ARHGAP22Q7Z5H3 698 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 TSPAN14Q8NG11 270 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 PHF10Q8WUB8 498 aaKnown RBP11.62□□□□□ -0.55
LAMA4-201ENST00000230538 SLC9A7Q96T83 725 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 ZNF670Q9BS34 389 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 RNPEPL1Q9HAU8 725 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 EVA1BQ9NVM1 165 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 HES2Q9Y543 173 aa11.62□□□□□ -0.55
LAMA4-201ENST00000230538 URADA6NGE7 173 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 CST1P01037 141 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 HGFP14210 728 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 RGS1Q08116 209 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 DACT2Q5SW24 774 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 LIPMQ5VYY2 423 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 SPESP1Q6UW49 350 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 SCIMPQ6UWF3 145 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 RPTNQ6XPR3 784 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 ARHGAP36Q6ZRI8 547 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 FAM71AQ8IYT1 594 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 DEPDC4Q8N2C3 294 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 CDYL2Q8N8U2 506 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 ANKRD52Q8NB46 1076 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 RDH11Q8TC12 318 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 CD101Q93033 1021 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 EXO5Q9H790 373 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 QSOX1O00391 747 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 LINC00032P0C843 101 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 KCNJ2P63252 427 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 PTPRNQ16849 979 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 PYDC2Q56P42 97 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 NEK5Q6P3R8 708 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 HELQQ8TDG4 1101 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 FERD3LQ96RJ6 166 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 WDR18Q9BV38 432 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 BRD9Q9H8M2 597 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 MCM8Q9UJA3 840 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 PSMD11O00231 422 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 SNX3O60493 162 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 KRT33AO76009 404 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 CCNYL3P0C7X3 344 aa11.61□□□□□ -0.55
LAMA4-201ENST00000230538 CYP4F2P78329 520 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms