RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 ItpkcQ7TS72 678 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Pcid2Q8BFV2 399 aaKnown RBP8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Insig1Q8BGI3 259 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 IfnzQ8BQT1 182 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Klhl38Q8BSF5 581 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Def6Q8C2K1 630 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Ephb1Q8CBF3 984 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Gm13278Q8CD73 182 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Mtnr1bQ8CIQ6 364 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 DdoQ922Z0 341 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Sytl1Q99N80 567 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Gtf2ird2Q99NI3 936 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Agpat3Q9D517 376 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Il1rl2Q9ERS7 574 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Clcn2Q9R0A1 908 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 Cldn3Q9Z0G9 219 aa8.79□□□□□ -1
Trim39-201ENSMUST00000042717 TriobpQ99KW3 2014 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Mki67E9PVX6 3177 aaKnown RBP8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Mcm3apQ9WUU9 1971 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Gm3604A0A087WPN2 559 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Gm13101A2ASJ0 481 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Gm3259D3YUK0 475 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Mroh5E9PUJ8 762 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Gm20431E9PY39 371 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Zfp758E9QAA1 583 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Pik3cdO35904 1043 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Tnk2O54967 1055 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Cdh1P09803 884 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Pou5f1P20263 352 aaKnown RBP8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Ccl5P30882 91 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Fgf13P70377 245 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 DhpsQ3TXU5 369 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Otol1Q4ZJM7 482 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 SnrpaQ62189 287 aaKnown RBP8.78□□□□□ -1
Trim39-201ENSMUST00000042717 GkQ64516 559 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Lingo3Q6GQU6 589 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Ints6Q6PCM2 883 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Far2Q7TNT2 515 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Tecpr1Q80VP0 1166 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Znf750Q8BH05 703 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Zfp398Q8BV16 643 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Camk1dQ8BW96 385 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Pacs1Q8K212 961 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Lmcd1Q8VEE1 365 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Rab30Q923S9 203 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Foxp3Q99JB6 429 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Mat2bQ99LB6 334 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Tchhl1Q9D3P1 638 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Kat2bQ9JHD1 813 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Pias4Q9JM05 507 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Tdrd6P61407 2134 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Gm9774A0A0A6YVU8 407 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Igkv5-39A0A0G2JDV4 115 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Arhgef37A1IGU4 676 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Gm382B1AXN3 1250 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Gm4450E9Q007 373 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Gm4847G3X946 537 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Grk4O70291 574 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Rc3h2P0C090 1187 aaKnown RBP8.78□□□□□ -1
Trim39-201ENSMUST00000042717 RhoP15409 348 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Ca3P16015 260 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Crabp2P22935 138 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Casp2P29594 452 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Serpina6Q06770 397 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Cyb5r4Q3TDX8 528 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Gpatch4Q3TFK5 415 aaKnown RBP8.78□□□□□ -1
Trim39-201ENSMUST00000042717 G2e3Q5RJY2 716 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 CcnhQ61458 323 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Hsd3b4Q61767 373 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Slco3a1Q8R3L5 710 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Zfp566Q8VCI1 386 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Aipl1Q924K1 328 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Xpo6Q924Z6 1125 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 DlstQ9D2G2 454 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Hes6Q9JHE6 224 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Cacng3Q9JJV5 315 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Vmn1r49Q9WUF1 310 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Tmem115Q9WUH1 350 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Mpp2Q9WV34 552 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Ror1Q9Z139 937 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Htatip2Q9Z2G9 242 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 MgamB5THE2 1827 aa8.78□□□□□ -1
Trim39-201ENSMUST00000042717 Zfp952B0V2W4 504 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 Psma3O70435 255 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 Hcn2O88703 863 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 PenkP22005 268 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 Cd19P25918 547 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 Rasgrf2P70392 1189 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 Tead4Q62296 427 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 Cyp2d40Q6P8N9 338 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 Olfr533Q7TRT7 320 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 Kctd2Q8CEZ0 266 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 Olfr371Q8VGB8 312 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 Atg13Q91YI1 516 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 Ndufab1Q9CR21 156 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 Mxra7Q9CZH7 178 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 Cdyl2Q9D5D8 503 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 PllpQ9DCU2 182 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 TfebQ9R210 475 aa8.77□□□□□ -1
Trim39-201ENSMUST00000042717 Dio2Q9Z1Y9 266 aa8.77□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms