RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Cul9Q80TT8 1865 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Vmn1r3A2AMT7 306 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 PpigA2AR02 752 aaKnown RBP10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 RerglB2RVE2 204 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Magea6O89010 325 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Htr4P97288 388 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Klra8Q60682 266 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Atp6v1hQ8BVE3 483 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Vmn1r79Q8R285 306 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Chrna3Q8R4G9 499 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tmem53Q9D0Z3 276 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ppil2Q9D787 521 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 KelQ9EQF2 713 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Vav3Q9R0C8 847 aa10.21□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Skint11A7XV14 364 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 R3hdm4Q4VBF2 262 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pde1aQ61481 565 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Nr2e1Q64104 385 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Styk1Q6J9G1 429 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ube2q1Q7TSS2 422 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Nim1kQ8BHI9 436 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tmem74Q8BQU7 305 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Acad10Q8K370 1069 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mlc1Q8VHK5 382 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 TraipQ8VIG6 470 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ndufs1Q91VD9 727 aaKnown RBP10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Fis1Q9CQ92 152 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Exo5Q9CXP9 373 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mrto4Q9D0I8 239 aaKnown RBP10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Rab27aQ9ERI2 221 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pidd1Q9ERV7 915 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tlr4Q9QUK6 835 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Iigp1Q9QZ85 413 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Acnat1A2AKK5 416 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm5849J3QPE5 117 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Stfa3P35173 103 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Clcn3P51791 818 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Lypla1P97823 230 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ly9Q01965 654 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Angptl1Q640P2 490 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gpd2Q64521 727 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Sez6lQ6P1D5 963 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Abhd10Q6PE15 297 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Arhgap33Q80YF9 1305 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pdzph1Q8BGR1 1238 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mark1Q8VHJ5 795 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Vwa7Q9JHA8 891 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm21897J3KMP5 500 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm16427J3QN52 483 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm21750L7N228 499 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm8906L7N2A2 181 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 LatO54957 242 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 GnazO70443 355 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Wnt7aP24383 349 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Rpl3P27659 403 aaKnown RBP10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 DcnP28654 354 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 HmgcrQ01237 887 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Alg10bQ3UGP8 474 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 CttnQ60598 546 aaKnown RBP10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Kpna1Q60960 538 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Adgrg1Q8K209 687 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Kdm4bQ91VY5 1086 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 PigxQ99LV7 254 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Q9D4W2 315 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Osbpl3Q9DBS9 855 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 H2-AaP01910 256 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Pex2P55098 305 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cdh6P97326 790 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 N4bp1Q6A037 893 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Q8BWQ6 963 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gspt1Q8R050 636 aaKnown RBP10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Olfr541Q8VGM0 312 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mrpl28Q9D1B9 257 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 PorcnQ9JJJ7 461 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mapk11Q9WUI1 364 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Spin2dB1B0R2 236 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Vmn2r70K7N702 854 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Rundc3aO08576 446 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Dpy19l2P0CW70 773 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Asgr1P34927 284 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Htr2cP34968 459 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Yy2Q3TTC2 378 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Tespa1Q3U132 458 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Q6GQV0 436 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Olfr814Q7TRH4 310 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 D3Ertd751eQ8BGN2 192 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ing4Q8C0D7 249 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Sult5a1Q91X36 291 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mov10l1Q99MV5 1187 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ankra2Q99PE2 312 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Ranbp3Q9CT10 491 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Znf687Q9D2D7 1237 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Gm21497A0A087WRK3 222 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Cyp4a12bA2A974 508 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Mup3P04939 184 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 ItgavP43406 1044 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Dlg3P70175 849 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Traf6P70196 530 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Plppr4Q7TME0 766 aa10.2□□□□□ -0.78
Ubr1-201ENSMUST00000028728 Disc1Q811T9 852 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms