RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Fam89aQ14BJ1 175 aa14.04□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Prr7Q3V0I2 269 aa14.04□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Slc30a1Q60738 503 aa14.04□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Stk40Q7TNL3 435 aa14.04□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Robo4Q8C310 1012 aa14.04□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Wdr73Q9CWR1 371 aa14.04□□□□□ -0.16
Col5a1-201ENSMUST00000028280 JcadQ5DTX6 1320 aa14.04□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ssxb8B1AY40 170 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Bbip1J3QMK2 67 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Itgb3O54890 787 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ifrd1P19182 449 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 B3gat3P58158 335 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tgoln2Q62314 363 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Olfr857Q7TRF7 309 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 MtrrQ8C1A3 696 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ppp1r16aQ923M0 524 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Stoml2Q99JB2 353 aaKnown RBP14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Neurl4Q5NCX5 1563 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Chil5A0A0G2JDS2 431 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Gm7694J3QNH8 270 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 WarsP32921 481 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Itga4Q00651 1039 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 D630036H23RikQ3UQD6 204 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tas2r115Q7M719 310 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 KyQ8C8H8 661 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Olfr170Q8VGL6 313 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Pcdhga6Q91XY2 932 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Znf639Q99KZ6 485 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Sirpb1aA0A0A6YYP6 397 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Rpl21O09167 160 aaKnown RBP14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 ZufspQ3T9Z9 577 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Gpsm3Q3U1Z5 159 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Syt16Q7TN83 639 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ints6lQ8BND4 861 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Pgm5Q8BZF8 567 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Grk5Q8VEB1 590 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Trub2Q91WG3 331 aaKnown RBP14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Nkiras2Q9CR56 191 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Spesp1Q9D5A0 399 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tob2Q9JM55 345 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ccdc88aQ5SNZ0 1873 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 NesQ6P5H2 1864 aaKnown RBP14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Olfr798Q7TRH8 311 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Smim5Q8BT42 78 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Lpgat1Q91YX5 370 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 EcdQ9CS74 641 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Mta2Q9R190 668 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Zcchc11B2RX14 1644 aaKnown RBP14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ube2e3P52483 207 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Klhl8P59280 629 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tlr12Q6QNU9 906 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Asnsd1Q8BFS9 627 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ssxb1Q9CPU1 170 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 MymkQ9D1N4 221 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ahdc1Q6PAL7 1594 aaKnown RBP14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Zfp563B8JJZ9 448 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Guca2bO09051 106 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Psme3P61290 254 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Gnb5P62881 395 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Lag3Q61790 521 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Zfp57Q8C6P8 421 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Rftn2Q8CHX7 500 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Olfr1484Q8VEU6 315 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tdrd1Q99MV1 1172 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 4931406B18RikA2RSL7 367 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Pfdn2O70591 154 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Psmd3P14685 530 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Nr2f1Q60632 422 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Echs1Q8BH95 290 aaKnown RBP14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 DnerQ8JZM4 737 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Ndufs1Q91VD9 727 aaKnown RBP14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 CatsperzQ9CQP8 194 aa14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Hnrnpa0Q9CX86 305 aaKnown RBP14.03□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Slc6a2O55192 617 aa14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Rnf220Q6PDX6 566 aa14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Phf10Q9D8M7 497 aa14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 VarsQ9Z1Q9 1263 aaKnown RBP14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Frmd7A2AD83 703 aa14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Zfp969A2ART2 485 aa14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Zfp973A2BE20 318 aa14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Hnf4aP49698 474 aa14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 MazP56671 477 aaKnown RBP14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Srbd1Q497V5 1015 aaKnown RBP14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tnfaip8l1Q8K288 186 aa14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Tdrd3Q91W18 743 aaKnown RBP14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Uchl1Q9R0P9 223 aa14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Zc3h13E9Q784 1729 aaKnown RBP14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Aldh1a7O35945 501 aa14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Clk1P22518 483 aa14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Aldh1a1P24549 501 aa14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Kcnj6P48542 425 aa14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Pih1d1Q9CQJ2 290 aa14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Acbd7Q9D258 88 aa14.02□□□□□ -0.16
Col5a1-201ENSMUST00000028280 Catsperg2C6KI89 1145 aa14.02□□□□□ -0.17
Col5a1-201ENSMUST00000028280 RxraP28700 467 aa14.02□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Fdft1P53798 416 aa14.02□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ezh1P70351 747 aa14.02□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Ica1P97411 478 aa14.02□□□□□ -0.17
Col5a1-201ENSMUST00000028280 StimateQ3UF25 288 aa14.02□□□□□ -0.17
Col5a1-201ENSMUST00000028280 Mfhas1Q3V1N1 1048 aa14.02□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms