RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Sema3dQ8BH34 777 aa10.96□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pxylp1Q8BHA9 480 aa10.96□□□□□ -0.66
Msh3-201ENSMUST00000022220 Smoc1Q8BLY1 463 aaKnown RBP10.96□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ldhal6bQ8BVP2 382 aa10.96□□□□□ -0.66
Msh3-201ENSMUST00000022220 Olfr345Q8VGK4 311 aa10.96□□□□□ -0.66
Msh3-201ENSMUST00000022220 Mlc1Q8VHK5 382 aa10.96□□□□□ -0.66
Msh3-201ENSMUST00000022220 Lysmd3Q99LE3 305 aa10.96□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ten1Q9D7K2 161 aa10.96□□□□□ -0.66
Msh3-201ENSMUST00000022220 Dtwd1Q9D8U7 304 aa10.96□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cldn3Q9Z0G9 219 aa10.96□□□□□ -0.66
Msh3-201ENSMUST00000022220 Myh14Q6URW6 2000 aa10.96□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gm45233A0A0N4SVE0 221 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gm10717D3Z1I8 228 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 F830016B08RikG3UWE2 416 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Il3P01586 166 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gsta1P13745 223 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Hk1P17710 974 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pou2f3P31362 431 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 P2rx3Q3UR32 397 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Lrrc47Q505F5 581 aaKnown RBP10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Rbbp7Q60973 425 aaKnown RBP10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gata6Q61169 589 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 ProcrQ64695 242 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gsta1Q6P8Q0 223 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Dusp16Q6PCP3 660 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Sarm1Q6PDS3 724 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Hspa13Q8BM72 471 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pacs1Q8K212 961 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Retreg1dQ8VE91 480 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pcdhb13Q91Y06 796 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Tcaf2Q921K8 919 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Dusp21Q9D9D8 189 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Olfr703Q9EPF5 319 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Marf1Q8BJ34 1730 aaKnown RBP10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Sf3b1Q99NB9 1304 aaKnown RBP10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ttll11A4Q9F4 727 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Dlg3P70175 849 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Bop1P97452 732 aaKnown RBP10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Mef2dQ63943 514 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Lrrc8eQ66JT1 795 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Krt72Q6IME9 520 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Lpcat4Q6NVG1 524 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Scaf4Q6PFF0 1209 aaKnown RBP10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Rab36Q8CAM5 267 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Tmem221Q8K071 230 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 LipmQ8K2A6 422 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pcdhb10Q91VE5 797 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Glra3Q91XP5 464 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Lpin1Q91ZP3 924 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Rfc5Q9D0F6 339 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Rpn2Q9DBG6 631 aaKnown RBP10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ralgps2Q9ERD6 590 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Bdp1Q571C7 2467 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Scn11aQ9R053 1765 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gbp11A9YVJ5 442 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Mybpc1D3YU50 1127 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Apol11bE9PUZ0 337 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Erich1E9PY43 332 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gm5160F8VPN3 147 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Vmn1r39G3UWE6 305 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Zc3h12bG3X9I7 835 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Calhm3J3QMI4 347 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ccdc61Q3UJV1 511 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gm5431Q5NCB3 844 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 DazlQ64368 298 aaKnown RBP10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Eif2s1Q6ZWX6 315 aaKnown RBP10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Hsfy2Q80Y37 392 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Exoc3l1Q8BI71 739 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pcdha6Q91Y14 946 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Spatc1lQ9D9W0 342 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Pak1ip1Q9DCE5 382 aaKnown RBP10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Paqr5Q9DCU0 330 aa10.95□□□□□ -0.66
Msh3-201ENSMUST00000022220 Gm3138K7N754 218 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Tnfaip1O70479 316 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Btg4O70552 250 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 UmpsP13439 481 aaKnown RBP10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Eml1Q05BC3 814 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Dsg1bQ7TSF1 1060 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 TbcelQ8C5W3 424 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Zfp62Q8C827 914 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Hacd3Q8K2C9 362 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Anxa13Q99JG3 317 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Fam212aQ9CX62 282 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Sesn3Q9CYP7 492 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Anks3Q9CZK6 655 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 ArskQ9D2L1 553 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 CabyrQ9D424 453 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Cdyl2Q9D5D8 503 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Satl1Q9D5N8 744 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Dctn3Q9Z0Y1 186 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Btaf1E9QAE3 1848 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Ltbp2O08999 1813 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Tmem45a2B7ZWJ5 289 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Fbrsl1E9Q9T0 1031 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Herc6F2Z461 1003 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 En1P09065 401 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 BpgmP15327 259 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 SpnP15702 395 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Serpina3cP29621 417 aa10.94□□□□□ -0.66
Msh3-201ENSMUST00000022220 Mxd1P50538 227 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms