RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Cntn3Q07409 1028 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Gm5800Q497L3 186 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Crtc1Q68ED7 630 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Ccdc184Q8BMK5 191 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Cops7bQ8BV13 264 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Snx15Q91WE1 337 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Gprc5bQ923Z0 410 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 PawrQ925B0 333 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Ecrg4Q99LS0 148 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Got2P05202 430 aaKnown RBP12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Atxn1lP0C7T6 687 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Tmed1Q3V009 227 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Kctd8Q50H33 476 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Wbp4Q61048 376 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Olfr1152Q7TR34 310 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Zfyve1Q810J8 777 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Susd6Q8BGE4 302 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Dupd1Q8BK84 215 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Adgrg2Q8CJ12 1009 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Vmn1r218Q8R261 298 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Lrrc42Q8R2U7 421 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Pcdhgb5Q91XX5 926 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 CygbQ9CX80 190 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Rexo2Q9D8S4 237 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 PllpQ9DCU2 182 aa12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 H2afyQ9QZQ8 372 aaKnown RBP12.13□□□□□ -0.47
Ctr9-201ENSMUST00000005749 ChkaO54804 453 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Cyp8b1O88962 500 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Tbx4P70325 552 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Bmp1P98063 991 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 DmwdQ08274 665 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 GmncQ3URY2 333 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Cpsf6Q6NVF9 551 aaKnown RBP12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Camk1dQ8BW96 385 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Slco2b1Q8BXB6 683 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Atg13Q91YI1 516 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 BollQ924M5 281 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 4930578G10RikQ9D4Q4 153 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Ank1Q02357 1862 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Gm4756A0A140LIS8 335 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Gm3526E9PZM0 191 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Adh6aE9Q5Z6 375 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Srp72F8VQC1 671 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Kpna4O35343 521 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Lypla1P97823 230 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Cd6Q61003 665 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Tas2r129Q7M709 320 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Osbpl6Q8BXR9 959 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Mta1Q8K4B0 715 aaKnown RBP12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Mrps33Q9D2R8 106 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Rasgef1cQ9D300 466 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Rgs3Q9DC04 966 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 RttnQ8R4Y8 2226 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Gm43951A0A0N4SUT6 962 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Gm3173A6NAS3 172 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Gm8267E9Q207 261 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Gm3020E9Q3J7 150 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Gm2897K7N6T7 172 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Inpp5jP59644 1003 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Crnkl1P63154 690 aaKnown RBP12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Kcnd1Q03719 651 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Gpsm3Q3U1Z5 159 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Naa11Q3UX61 218 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Luc7l3Q5SUF2 432 aaKnown RBP12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Kiaa0895Q7TQE7 519 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Rhbdf2Q80WQ6 827 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Sfr1Q8BP27 319 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Gm3411Q8C7R2 150 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Ca12Q8CI85 354 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 CopaQ8CIE6 1224 aaKnown RBP12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Eif3lQ8QZY1 564 aaKnown RBP12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 NlnQ91YP2 704 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Tm9sf1Q9DBU0 606 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 PrccQ9EQC8 491 aaKnown RBP12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Htra2Q9JIY5 458 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Lmx1aQ9JKU8 382 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Spry1Q9QXV9 313 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 PigqQ9QYT7 581 aa12.12□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Prdm15E9Q8T2 1174 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Fgf10O35565 209 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Cyp4a14O35728 507 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Fzd1O70421 642 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Cd4P06332 457 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Creb1Q01147 341 aaKnown RBP12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 BtrcQ3ULA2 605 aaKnown RBP12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 McuQ3UMR5 350 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Hesx1Q61658 185 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Syt14Q7TN84 555 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Sh3rf2Q8BZT2 735 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Zfp62Q8C827 914 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 NaprtQ8CC86 538 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Fbxl8Q8CIG9 374 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Pnpla8Q8K1N1 776 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Hid1Q8R1F6 788 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 4930524N10RikQ9D519 233 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Glipr1l1Q9DAG6 236 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Poc5Q9DBS8 558 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Dgcr8Q9EQM6 773 aa12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Tada2bD3Z4Z0 420 aaKnown RBP12.11□□□□□ -0.47
Ctr9-201ENSMUST00000005749 Maml3D4QGC2 1135 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms