RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Tmed11Q9D2R4 215 aa12.84□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Dusp21Q9D9D8 189 aa12.84□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Stk19Q9JHN8 254 aa12.84□□□□□ -0.35
Clcn3-201ENSMUST00000004430 RapsnP12672 412 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 BgnP28653 369 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Nr5a2P45448 560 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Clec12aQ504P2 267 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Ints7Q7TQK1 966 aaKnown RBP12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Xylt1Q811B1 953 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Pcid2Q8BFV2 399 aaKnown RBP12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Grik4Q8BMF5 956 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Kctd12bQ8C7J6 292 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Far1Q922J9 515 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 DhddsQ99KU1 333 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Bbs2Q9CWF6 721 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Syde1Q9DBZ9 737 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 RhojQ9ER71 214 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gpc1Q9QZF2 557 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Morc1Q9WVL5 950 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Cyp4a12bA2A974 508 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Kctd18E0CZ26 429 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gm6811E9Q3Y8 510 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Chrna4O70174 629 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Stt3aP46978 705 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Trpv5P69744 723 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Mtf2Q02395 593 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 SvoplQ6PDF3 494 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Klhl42Q8BFQ9 493 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Zbtb33Q8BN78 671 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 PdgfcQ8CI19 345 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 LipmQ8K2A6 422 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Cyp4a12aQ91WL5 508 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Prmt7Q922X9 692 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Mcrs1Q99L90 462 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Cnbd2Q9D5U8 673 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Sh3glb1Q9JK48 365 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Mpp6Q9JLB0 553 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Trip4Q9QXN3 581 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Cyb561d2Q9WUE3 222 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Kcnt2D3Z649 1135 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 F6Y6L6 278 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Phkg1P07934 388 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 St3gal1P54751 337 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Trafd1Q3UDK1 580 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 HiraQ61666 1015 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Zdhhc17Q80TN5 632 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Rmdn2Q8BSE0 410 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Ankrd52Q8BTI7 1076 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 4921511C20RikQ8BVT7 469 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Rsph1Q8VIG3 301 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 PrkxQ922R0 355 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Ifi44lQ9BDB7 447 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Vta1Q9CR26 309 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Wdr83Q9DAJ4 315 aaKnown RBP12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Slc13a2Q9ES88 586 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Aldh1a3Q9JHW9 512 aa12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Ddx21Q9JIK5 851 aaKnown RBP12.83□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Znf536Q8K083 1302 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gm3636E9Q5P1 227 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gm10639E9Q6L7 222 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Has3O08650 554 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gsta2P10648 222 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Mcpt1P11034 246 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 PtpraP18052 829 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Il6raP22272 460 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 YwhaqP68254 245 aaKnown RBP12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Cdh6P97326 790 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Gabpb1Q00420 383 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 HexdcQ3U4H6 486 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Arhgef9Q3UTH8 516 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Adora2aQ60613 410 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Klra8Q60682 266 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Nfe2l1Q61985 741 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Znf185Q62394 352 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Brsk2Q69Z98 735 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Trim36Q80WG7 729 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Amigo2Q80ZD9 519 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Q8BH50 245 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 BoraQ8BS90 525 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Acsm2Q8K0L3 575 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Ccdc86Q9JJ89 426 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 QkiQ9QYS9 341 aaKnown RBP12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Sept5Q9Z2Q6 369 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 VirmaA2AIV2 1811 aaKnown RBP12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Vmn2r-ps130A0A140T8U3 855 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Aldoart1A6ZI46 419 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Il4i1O09046 630 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Ap3d1O54774 1199 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Stfa3P35173 103 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 ItgavP43406 1044 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 PgrQ00175 926 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Mfsd3Q5U419 412 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Mapre1Q61166 268 aaKnown RBP12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Runx1t1Q61909 577 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Pcbp2Q61990 362 aaKnown RBP12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Prkaa2Q8BRK8 552 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 RorbQ8R1B8 470 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Zdhhc12Q8VC90 267 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Evi2bQ8VD58 444 aa12.82□□□□□ -0.36
Clcn3-201ENSMUST00000004430 Pcdha3Q91Y16 942 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 60.2 ms