RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 GANCQ8TET4 914 aa21.8■■□□□ 1.08
TSPAN9-208ENST00000640568 LRRC45Q96CN5 670 aa21.8■■□□□ 1.08
TSPAN9-208ENST00000640568 ZNF641Q96N77 438 aaPredicted RBP21.8■■□□□ 1.08
TSPAN9-208ENST00000640568 SUV39H2Q9H5I1 410 aa21.8■■□□□ 1.08
TSPAN9-208ENST00000640568 PCDH9Q9HC56 1237 aa21.8■■□□□ 1.08
TSPAN9-208ENST00000640568 PRMT8Q9NR22 394 aaPredicted RBP21.8■■□□□ 1.08
TSPAN9-208ENST00000640568 SARDHQ9UL12 918 aa21.8■■□□□ 1.08
TSPAN9-208ENST00000640568 CACNA1IQ9P0X4 2223 aa21.8■■□□□ 1.08
TSPAN9-208ENST00000640568 CTAGE15A4D2H0 777 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 SOCS5O75159 536 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 ANXA9O76027 345 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 CTAGE8P0CG41 777 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 GEMP55040 296 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 DR1Q01658 176 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 TRIP13Q15645 432 aaPredicted RBP21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 ZNF805Q5CZA5 627 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 PRUNE1Q86TP1 453 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 CTAGE6Q86UF2 777 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 CTAGE4Q8IX94 777 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 SPATA22Q8NHS9 363 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 OMDQ99983 421 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 UBP1Q9NZI7 540 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 FAM153AQ9UHL3 310 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 NCKAP1Q9Y2A7 1128 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 AAR2Q9Y312 384 aaKnown RBP21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 PCDHGC4Q9Y5F7 938 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 RAI2Q9Y5P3 530 aa21.79■■□□□ 1.08
TSPAN9-208ENST00000640568 A0A1W2PQ67 120 aa21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 MT-CYBP00156 380 aaPredicted RBP21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 ZSCAN5DPP0CG00 497 aa21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 ITGB7P26010 798 aa21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 FDFT1P37268 417 aa21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 VPS41P49754 854 aa21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 SKOR1P84550 965 aa21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 CCDC15Q0P6D6 951 aa21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 MPP3Q13368 585 aa21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 DHX34Q14147 1143 aaKnown RBP21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 PCSK7Q16549 785 aa21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 TAB3Q8N5C8 712 aaPredicted RBP21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 GLIS1Q8NBF1 620 aa21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 CCHCR1Q8TD31 782 aa21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 IFT43Q96FT9 208 aa21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 TPSD1Q9BZJ3 242 aa21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 PABPC3Q9H361 631 aaKnown RBP21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 VPS45Q9NRW7 570 aa21.78■■□□□ 1.08
TSPAN9-208ENST00000640568 E7EVH7 732 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 K7ESF4 209 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 PMPCBO75439 489 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 MMP2P08253 660 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 XPAP23025 273 aaPredicted RBP21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 RPL22P35268 128 aaKnown RBP21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 PXNP49023 591 aaPredicted RBP21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 LMAN1P49257 510 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 CSTF1Q05048 431 aaKnown RBP21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 TRAF2Q12933 501 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 SLC14A2Q15849 920 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 ARMC12Q5T9G4 340 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 FAXCQ5TGI0 409 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 TSSK4Q6SA08 328 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 MAATS1Q7Z4T9 603 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 PRPF39Q86UA1 669 aaKnown RBP21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 KBTBD6Q86V97 674 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 RASSF3Q86WH2 238 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 HDDC3Q8N4P3 179 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 FSD1LQ9BXM9 530 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 TDRD1Q9BXT4 1180 aaKnown RBP21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 RAB6BQ9NRW1 208 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 FBXL12Q9NXK8 326 aa21.77■■□□□ 1.08
TSPAN9-208ENST00000640568 A0A1W2PP55 124 aa21.77■■□□□ 1.07
TSPAN9-208ENST00000640568 DLL1O00548 723 aa21.77■■□□□ 1.07
TSPAN9-208ENST00000640568 RNASEH2AO75792 299 aaKnown RBP21.77■■□□□ 1.07
TSPAN9-208ENST00000640568 METTL18O95568 372 aa21.77■■□□□ 1.07
TSPAN9-208ENST00000640568 BASP1P80723 227 aaKnown RBP21.77■■□□□ 1.07
TSPAN9-208ENST00000640568 FBXL19Q6PCT2 694 aa21.77■■□□□ 1.07
TSPAN9-208ENST00000640568 BRAT1Q6PJG6 821 aa21.77■■□□□ 1.07
TSPAN9-208ENST00000640568 SYDE1Q6ZW31 735 aaPredicted RBP21.77■■□□□ 1.07
TSPAN9-208ENST00000640568 IPMKQ8NFU5 416 aa21.77■■□□□ 1.07
TSPAN9-208ENST00000640568 HCAR2Q8TDS4 363 aa21.77■■□□□ 1.07
TSPAN9-208ENST00000640568 SLCO2A1Q92959 643 aa21.77■■□□□ 1.07
TSPAN9-208ENST00000640568 ARRDC3Q96B67 414 aa21.77■■□□□ 1.07
TSPAN9-208ENST00000640568 EBF1Q9UH73 591 aa21.77■■□□□ 1.07
TSPAN9-208ENST00000640568 ASIC3Q9UHC3 531 aa21.77■■□□□ 1.07
TSPAN9-208ENST00000640568 PCDHB9Q9Y5E1 797 aa21.77■■□□□ 1.07
TSPAN9-208ENST00000640568 C16orf96A6NNT2 1141 aa21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 TRAFD1O14545 582 aaPredicted RBP21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 AXIN1O15169 862 aa21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 HTRA2O43464 458 aaPredicted RBP21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 ZNF217O75362 1048 aa21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 CPP00450 1065 aa21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 NFKBIAP25963 317 aa21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 NEK3P51956 506 aa21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 EPHB1P54762 984 aa21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 POLR2LP62875 67 aaKnown RBP21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 GPS1Q13098 491 aa21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 CCDC70Q6NSX1 233 aa21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 ERN2Q76MJ5 926 aaKnown RBP21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 PARS2Q7L3T8 475 aaKnown RBP21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 NDUFAF2Q8N183 169 aa21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 OXNAD1Q96HP4 312 aaPredicted RBP21.76■■□□□ 1.07
TSPAN9-208ENST00000640568 NSMCE3Q96MG7 304 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms