RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 RBMS3Q6XE24 437 aaKnown RBP0.67□□□□□ -2.3
LMBR1-222ENST00000638959 NPM2Q86SE8 214 aaKnown RBP0.67□□□□□ -2.3
LMBR1-222ENST00000638959 TMEM200AQ86VY9 491 aa0.67□□□□□ -2.3
LMBR1-222ENST00000638959 KCNMB4Q86W47 210 aa0.67□□□□□ -2.3
LMBR1-222ENST00000638959 TMEM219Q86XT9 240 aa0.67□□□□□ -2.3
LMBR1-222ENST00000638959 FAR1Q8WVX9 515 aa0.67□□□□□ -2.3
LMBR1-222ENST00000638959 HPS3Q969F9 1004 aa0.67□□□□□ -2.3
LMBR1-222ENST00000638959 CDCA5Q96FF9 252 aa0.67□□□□□ -2.3
LMBR1-222ENST00000638959 RPP25Q9BUL9 199 aaKnown RBP0.67□□□□□ -2.3
LMBR1-222ENST00000638959 IFT27Q9BW83 186 aa0.67□□□□□ -2.3
LMBR1-222ENST00000638959 FAM126AQ9BYI3 521 aaPredicted RBP0.67□□□□□ -2.3
LMBR1-222ENST00000638959 TRIM6Q9C030 488 aaPredicted RBP0.67□□□□□ -2.3
LMBR1-222ENST00000638959 SLKQ9H2G2 1235 aaPredicted RBP0.67□□□□□ -2.3
LMBR1-222ENST00000638959 FKRPQ9H9S5 495 aa0.67□□□□□ -2.3
LMBR1-222ENST00000638959 PRDM11Q9NQV5 511 aa0.67□□□□□ -2.3
LMBR1-222ENST00000638959 TYW1Q9NV66 732 aaKnown RBP0.67□□□□□ -2.3
LMBR1-222ENST00000638959 B4GALT7Q9UBV7 327 aa0.67□□□□□ -2.3
LMBR1-222ENST00000638959 FBXO40Q9UH90 709 aa0.67□□□□□ -2.3
LMBR1-222ENST00000638959 ZNF180Q9UJW8 692 aa0.67□□□□□ -2.3
LMBR1-222ENST00000638959 A0A0A0MQY5 61 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 CFAP69A5D8W1 941 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 ENPP3O14638 875 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 CLIC2O15247 247 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 CEP104O60308 925 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 ZNF354AO60765 605 aaPredicted RBP0.66□□□□□ -2.3
LMBR1-222ENST00000638959 COQ9O75208 318 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 NTSR2O95665 410 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 TPOP07202 933 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 FRMD6-AS1P0C7T7 363 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 GNL1P36915 607 aaPredicted RBP0.66□□□□□ -2.3
LMBR1-222ENST00000638959 TMPOP42166 694 aaKnown RBP0.66□□□□□ -2.3
LMBR1-222ENST00000638959 MASP1P48740 699 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 AARSP49588 968 aaKnown RBP eCLIP0.66□□□□□ -2.3
LMBR1-222ENST00000638959 LYZP61626 148 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 SPOCK1Q08629 439 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 GBX1Q14549 363 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 EFNB3Q15768 340 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 AMZ1Q400G9 498 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 FFAR4Q5NUL3 377 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 PAPPA-AS1Q5QFB9 102 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 ADAMTSL4-AS1Q5T5F5 129 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 ANKRD40Q6AI12 368 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 NCAPH2Q6IBW4 605 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 BHLHB9Q6PI77 547 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 TBC1D1Q86TI0 1168 aaPredicted RBP0.66□□□□□ -2.3
LMBR1-222ENST00000638959 ZC3HC1Q86WB0 502 aaKnown RBP0.66□□□□□ -2.3
LMBR1-222ENST00000638959 MB21D2Q8IYB1 491 aaPredicted RBP0.66□□□□□ -2.3
LMBR1-222ENST00000638959 FCAMRQ8WWV6 532 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 RASL10AQ92737 203 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 GRAMD1AQ96CP6 724 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 CHRDL1Q9BU40 450 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 POLR3CQ9BUI4 534 aaPredicted RBP0.66□□□□□ -2.3
LMBR1-222ENST00000638959 ZBTB26Q9HCK0 441 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 Q9N2J8 555 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 KCNK9Q9NPC2 374 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 ATAD3AQ9NVI7 634 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 C1RLQ9NZP8 487 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 TMEM181Q9P2C4 612 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 RGS17Q9UGC6 210 aaPredicted RBP0.66□□□□□ -2.3
LMBR1-222ENST00000638959 PKP3Q9Y446 797 aa0.66□□□□□ -2.3
LMBR1-222ENST00000638959 SOCS6O14544 535 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 NKX2-8O15522 239 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 HSPA12AO43301 675 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 SNUPNO95149 360 aaKnown RBP0.65□□□□□ -2.31
LMBR1-222ENST00000638959 ALOX5P09917 674 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 SLC6A12P48065 614 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 TLE3Q04726 772 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 MTMR1Q13613 665 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 FAXCQ5TGI0 409 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 WDR73Q6P4I2 378 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 B3GNT9Q6UX72 402 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 SHFQ7M4L6 423 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 TRIM74Q86UV6 250 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 TRIM73Q86UV7 250 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 WDR5BQ86VZ2 330 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 SLC22A17Q8WUG5 538 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 HDAC7Q8WUI4 952 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 SLC20A1Q8WUM9 679 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 HSPBAP1Q96EW2 488 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 ZNF285Q96NJ3 590 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 TLR8Q9NR97 1041 aaKnown RBP0.65□□□□□ -2.31
LMBR1-222ENST00000638959 ZBTB1Q9Y2K1 713 aa0.65□□□□□ -2.31
LMBR1-222ENST00000638959 PDS5AQ29RF7 1337 aaKnown RBP0.64□□□□□ -2.31
LMBR1-222ENST00000638959 MST1RQ04912 1400 aa0.64□□□□□ -2.31
LMBR1-222ENST00000638959 A0A096LPK6 155 aa0.64□□□□□ -2.31
LMBR1-222ENST00000638959 PRR32B1ATL7 298 aa0.64□□□□□ -2.31
LMBR1-222ENST00000638959 IGSF3O75054 1194 aa0.64□□□□□ -2.31
LMBR1-222ENST00000638959 UBXN7O94888 489 aa0.64□□□□□ -2.31
LMBR1-222ENST00000638959 HLA-DQA2P01906 255 aa0.64□□□□□ -2.31
LMBR1-222ENST00000638959 GPTP24298 496 aa0.64□□□□□ -2.31
LMBR1-222ENST00000638959 MST1P26927 711 aa0.64□□□□□ -2.31
LMBR1-222ENST00000638959 SNRPD1P62314 119 aaKnown RBP0.64□□□□□ -2.31
LMBR1-222ENST00000638959 RPP30P78346 268 aaKnown RBP0.64□□□□□ -2.31
LMBR1-222ENST00000638959 FAM27E3Q08E93 113 aa0.64□□□□□ -2.31
LMBR1-222ENST00000638959 ZNF267Q14586 743 aaPredicted RBP0.64□□□□□ -2.31
LMBR1-222ENST00000638959 CNGA2Q16280 664 aa0.64□□□□□ -2.31
LMBR1-222ENST00000638959 AAK1Q2M2I8 961 aa0.64□□□□□ -2.31
LMBR1-222ENST00000638959 KCNT1Q5JUK3 1230 aa0.64□□□□□ -2.31
LMBR1-222ENST00000638959 ATAT1Q5SQI0 421 aa0.64□□□□□ -2.31
LMBR1-222ENST00000638959 FHL5Q5TD97 284 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms