RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 CLDN2P57739 230 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 IRX6P78412 446 aaPredicted RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 CBLBQ13191 982 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 TBCELQ5QJ74 424 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 HTR3DQ70Z44 454 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 WDR53Q7Z5U6 358 aaPredicted RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 TREML1Q86YW5 311 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 BEND7Q8N7W2 519 aaPredicted RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 GPATCH11Q8N954 259 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 TTC9Q92623 222 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 RSPRY1Q96DX4 576 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 RPL10LQ96L21 214 aaKnown RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 NDC1Q9BTX1 674 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 NAA15Q9BXJ9 866 aaKnown RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 UNKQ9C0B0 810 aaKnown RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 PRSS16Q9NQE7 514 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 NDRG3Q9UGV2 375 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 MYO6Q9UM54 1294 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 USP24Q9UPU5 2620 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 SMC3Q9UQE7 1217 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 TCHHQ07283 1943 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 TEP1Q99973 2627 aaKnown RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 IFRD1O00458 451 aaPredicted RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 TFECO14948 347 aaPredicted RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 MDM4O15151 490 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 MAN1A2O60476 641 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 CPNE3O75131 537 aaKnown RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 CLDN14O95500 239 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 ZNF24P17028 368 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 OCRLQ01968 901 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 CHAF1BQ13112 559 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 MRPL49Q13405 166 aaKnown RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 PPP2R5EQ16537 467 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 MED25Q71SY5 747 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 CLEC14AQ86T13 490 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 BPHLQ86WA6 291 aaPredicted RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 XXYLT1Q8NBI6 393 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 UBE2FQ969M7 185 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 ZNF396Q96N95 335 aaPredicted RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 ZNF518BQ9C0D4 1074 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 ATG10Q9H0Y0 220 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 DNAJC25Q9H1X3 360 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 PNPLA8Q9NP80 782 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 ERVK-11Q9UQG0 969 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 A8MUI8 341 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 RBAK-RBAKDNI3L0D1 243 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 ALOX15BO15296 676 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 ZBED1O96006 694 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 FOSL1P15407 271 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 POU3F2P20265 443 aaPredicted RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 FPR1P21462 350 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 CCR1P32246 355 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 ADRA1BP35368 520 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 LONP1P36776 959 aaKnown RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 PMS2P54278 862 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 ANAPC15P60006 121 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 TUBB3Q13509 450 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 VEZF1Q14119 521 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 PPP1R15BQ5SWA1 713 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 FNBP1LQ5T0N5 605 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 TMC8Q8IU68 726 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 TEX29Q8N6K0 151 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 SLC2A14Q8TDB8 520 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 SKA2Q8WVK7 121 aaPredicted RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 NINJ1Q92982 152 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 SMARCE1Q969G3 411 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 WDR83Q9BRX9 315 aaKnown RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 OSBPL1AQ9BXW6 950 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 GPR87Q9BY21 358 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 NLNQ9BYT8 704 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 C19orf25Q9UFG5 118 aaPredicted RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 IL36AQ9UHA7 158 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 CDC23Q9UJX2 597 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 KLF2Q9Y5W3 355 aaPredicted RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 TCAF2A6NFQ2 919 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 CYTH3O43739 400 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 DNAJB6O75190 326 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 CLDN11O75508 207 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 POP4O95707 220 aaKnown RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 STAU1O95793 577 aaKnown RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 UGT2B4P06133 528 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 CYP21A2P08686 494 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 LINC00271P0C7V0 271 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 KRT9P35527 623 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 NCKAP1LP55160 1127 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 NME3Q13232 169 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 CAMK2GQ13555 558 aaPredicted RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 PCBP2Q15366 365 aaKnown RBP eCLIP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 KLHL22Q53GT1 634 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 TDRD12Q587J7 1177 aaKnown RBP4.41□□□□□ -1.7
GABRA1-220ENST00000638159 SHEQ5VZ18 495 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 ANKS6Q68DC2 871 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 TBC1D19Q8N5T2 526 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 GALNT6Q8NCL4 622 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 SPATA3Q8NHX4 192 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 MS4A3Q96HJ5 214 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 CCDC74BQ96LY2 380 aa4.41□□□□□ -1.7
GABRA1-220ENST00000638159 TGM7Q96PF1 710 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms