RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 SPECC1LQ69YQ0 1117 aa18.63■□□□□ 0.57
CLN6-214ENST00000636314 TMEM145Q8NBT3 493 aa18.63■□□□□ 0.57
CLN6-214ENST00000636314 NETO2Q8NC67 525 aa18.63■□□□□ 0.57
CLN6-214ENST00000636314 RNF214Q8ND24 703 aa18.63■□□□□ 0.57
CLN6-214ENST00000636314 RAB7BQ96AH8 199 aa18.63■□□□□ 0.57
CLN6-214ENST00000636314 KLHL32Q96NJ5 620 aa18.63■□□□□ 0.57
CLN6-214ENST00000636314 UBL7Q96S82 380 aaPredicted RBP18.63■□□□□ 0.57
CLN6-214ENST00000636314 PDFQ9HBH1 243 aa18.63■□□□□ 0.57
CLN6-214ENST00000636314 FZD3Q9NPG1 666 aa18.63■□□□□ 0.57
CLN6-214ENST00000636314 IP6K2Q9UHH9 426 aa18.63■□□□□ 0.57
CLN6-214ENST00000636314 ZFR2Q9UPR6 939 aaKnown RBP18.63■□□□□ 0.57
CLN6-214ENST00000636314 FADS3Q9Y5Q0 445 aa18.63■□□□□ 0.57
CLN6-214ENST00000636314 H3BRJ5 948 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 NEMP1O14524 444 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 PRAMEF11O60813 436 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 RFPL3O75679 317 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 PRB1P04280 392 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 CYP1A2P05177 515 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 IL1R2P27930 398 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 EPHA8P29322 1005 aaPredicted RBP18.62■□□□□ 0.57
CLN6-214ENST00000636314 HNRNPH3P31942 346 aaKnown RBP18.62■□□□□ 0.57
CLN6-214ENST00000636314 ARL4AP40617 200 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 ABL2P42684 1182 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 PAPOLAP51003 745 aaKnown RBP18.62■□□□□ 0.57
CLN6-214ENST00000636314 RPS21P63220 83 aaKnown RBP18.62■□□□□ 0.57
CLN6-214ENST00000636314 SEMG2Q02383 582 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 MAPK8IP2Q13387 824 aaPredicted RBP18.62■□□□□ 0.57
CLN6-214ENST00000636314 TMEM259Q4ZIN3 620 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 GDPD4Q6W3E5 623 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 LRRC69Q6ZNQ3 347 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 ZSCAN30Q86W11 494 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 HSPH1Q92598 858 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 ARHGEF26Q96DR7 871 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 KLHDC7BQ96G42 594 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 FEM1CQ96JP0 617 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 BTBD6Q96KE9 485 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 EXOC2Q96KP1 924 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 SLC39A8Q9C0K1 460 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 ERVMER34-1Q9H9K5 563 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 SP110Q9HB58 689 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.62■□□□□ 0.57
CLN6-214ENST00000636314 LHX3Q9UBR4 397 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 PCDHGA1Q9Y5H4 931 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 AK5Q9Y6K8 562 aa18.62■□□□□ 0.57
CLN6-214ENST00000636314 J3KR12 359 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 DFFAO00273 331 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 TPM1P09493 284 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 THEGLP0DJG4 465 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 TCF4P15884 667 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 ITPKBP27987 946 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 EIF4A3P38919 411 aaKnown RBP18.61■□□□□ 0.57
CLN6-214ENST00000636314 HCAR3P49019 387 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 DPYSQ14117 519 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 DPYSL2Q16555 572 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 BOLA3Q53S33 107 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 SPATS2Q86XZ4 545 aaKnown RBP18.61■□□□□ 0.57
CLN6-214ENST00000636314 EID2Q8N6I1 236 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 NPWQ8N729 165 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 NIPA2Q8N8Q9 360 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 DEF6Q9H4E7 631 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 CWC15Q9P013 229 aaKnown RBP18.61■□□□□ 0.57
CLN6-214ENST00000636314 ITM2BQ9Y287 266 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 MFHAS1Q9Y4C4 1052 aa18.61■□□□□ 0.57
CLN6-214ENST00000636314 TSPAN6O43657 245 aa18.6■□□□□ 0.57
CLN6-214ENST00000636314 C19orf57Q0VDD7 668 aa18.6■□□□□ 0.57
CLN6-214ENST00000636314 CYTH1Q15438 398 aa18.6■□□□□ 0.57
CLN6-214ENST00000636314 SHBQ15464 509 aa18.6■□□□□ 0.57
CLN6-214ENST00000636314 AFMIDQ63HM1 303 aa18.6■□□□□ 0.57
CLN6-214ENST00000636314 ARHGAP12Q8IWW6 846 aa18.6■□□□□ 0.57
CLN6-214ENST00000636314 OR8K1Q8NGG5 319 aa18.6■□□□□ 0.57
CLN6-214ENST00000636314 ZNF564Q8TBZ8 553 aaPredicted RBP18.6■□□□□ 0.57
CLN6-214ENST00000636314 SAP25Q8TEE9 199 aa18.6■□□□□ 0.57
CLN6-214ENST00000636314 TEKT4Q8WW24 435 aa18.6■□□□□ 0.57
CLN6-214ENST00000636314 VOPP1Q96AW1 172 aa18.6■□□□□ 0.57
CLN6-214ENST00000636314 CALN1Q9BXU9 219 aa18.6■□□□□ 0.57
CLN6-214ENST00000636314 SLC17A9Q9BYT1 436 aa18.6■□□□□ 0.57
CLN6-214ENST00000636314 ZNHIT6Q9NWK9 470 aaKnown RBP18.6■□□□□ 0.57
CLN6-214ENST00000636314 SETXQ7Z333 2677 aaKnown RBP18.6■□□□□ 0.57
CLN6-214ENST00000636314 ANKRD36A6QL64 1941 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 A6NNZ2 444 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 MYO1FO00160 1098 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 TLX3O43711 291 aaPredicted RBP18.59■□□□□ 0.57
CLN6-214ENST00000636314 C1SP09871 688 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 RARAP10276 462 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 CDK4P11802 303 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 SSR1P43307 286 aaKnown RBP18.59■□□□□ 0.57
CLN6-214ENST00000636314 ACADVLP49748 655 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 CLDN2P57739 230 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 TARDBPQ13148 414 aaKnown RBP eCLIP18.59■□□□□ 0.57
CLN6-214ENST00000636314 GRM3Q14832 879 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 SLC18A3Q16572 532 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 TSR1Q2NL82 804 aaKnown RBP18.59■□□□□ 0.57
CLN6-214ENST00000636314 LRRC73Q5JTD7 316 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 HES3Q5TGS1 186 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 TMCO3Q6UWJ1 677 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 GCNT7Q6ZNI0 430 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 PTAR1Q7Z6K3 402 aaPredicted RBP18.59■□□□□ 0.57
CLN6-214ENST00000636314 TTC7BQ86TV6 843 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 VSTM4Q8IW00 320 aa18.59■□□□□ 0.57
CLN6-214ENST00000636314 LZTR1Q8N653 840 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms