RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 NPHS1O60500 1241 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 SMNDC1O75940 238 aaKnown RBP eCLIP8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 CNTN5O94779 1100 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 CPB1P15086 417 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 ELNP15502 786 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 CD86P42081 329 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 ACLYP53396 1101 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 EPHB1P54762 984 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 KLC1Q07866 573 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 SLC10A7Q0GE19 358 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 PSMD5Q16401 504 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 LSM12Q3MHD2 195 aaKnown RBP8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 ALFQ53S48 1182 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 TSTD2Q5T7W7 516 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 RNF180Q86T96 592 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 LSMEM2Q8N112 164 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 LINC01599Q8WXQ3 324 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 PABPC5Q96DU9 382 aaKnown RBP8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 BTN2A3PQ96KV6 586 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 LENG8Q96PV6 779 aaPredicted RBP8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 ZNF184Q99676 751 aaPredicted RBP8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 OMDQ99983 421 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 CCDC28BQ9BUN5 200 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 OSBPL1AQ9BXW6 950 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 S100A14Q9HCY8 104 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 CLIC5Q9NZA1 410 aa8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 ABT1Q9ULW3 272 aaKnown RBP8.4□□□□□ -1.07
SND1-IT1-201ENST00000623342 FAM92AA1XBS5 289 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 TMEM88BA6NKF7 163 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 ZMPSTE24O75844 475 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 PDE5AO76074 875 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 SNUPNO95149 360 aaKnown RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 PAPSS2O95340 614 aaPredicted RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 BAG2O95816 211 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 PDHA1P08559 390 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 THRAP10827 490 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 HAPLN1P10915 354 aaPredicted RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 YWHAQP27348 245 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 EPHA3P29320 983 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 SERPINB5P36952 375 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 LEPRP48357 1165 aaKnown RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 ERFP50548 548 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 DNAJB13P59910 316 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 MAXP61244 160 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 MRPS35P82673 323 aaKnown RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 TNK2Q07912 1038 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 TBL3Q12788 808 aaKnown RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 PEX6Q13608 980 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 MBTPS1Q14703 1052 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 TRIP4Q15650 581 aaPredicted RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 CTXN3Q4LDR2 81 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 CNSTQ6PJW8 725 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 TRAF7Q6Q0C0 670 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 ADGRG6Q86SQ4 1221 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 ZNF354CQ86Y25 554 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 PLCD3Q8N3E9 789 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 FBXW8Q8N3Y1 598 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 SPATA6LQ8N4H0 392 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 CPSF7Q8N684 471 aaKnown RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 SHKBP1Q8TBC3 707 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 MICAL1Q8TDZ2 1067 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 HEXDCQ8WVB3 486 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 JADE3Q92613 823 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 FBXO32Q969P5 355 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 FAM136AQ96C01 138 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 PPP1R36Q96LQ0 422 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 KLHL5Q96PQ7 755 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 TTC1Q99614 292 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 NUF2Q9BZD4 464 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 OLA1Q9NTK5 396 aaKnown RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 PPM1HQ9ULR3 514 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 CORO1CQ9ULV4 474 aaPredicted RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 CDYLQ9Y232 598 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 TLL2Q9Y6L7 1015 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 TTC3P53804 2025 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 RGSL1A5PLK6 1076 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 AURKAO14965 403 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 RTN3O95197 1032 aaPredicted RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 MMP2P08253 660 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 ATP5F1P24539 256 aaPredicted RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 PIK3R1P27986 724 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 ADSLP30566 484 aaPredicted RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 CLCN5P51795 746 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 DSC2Q02487 901 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 MSLNQ13421 630 aaPredicted RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 FAM83EQ2M2I3 478 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 RBM20Q5T481 1227 aaKnown RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 MAP3K21Q5TCX8 1036 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 RAP1GAP2Q684P5 730 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 IRGCQ6NXR0 463 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 FBXL22Q6P050 247 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 PIWIL4Q7Z3Z4 852 aaKnown RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 GALNT7Q86SF2 657 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 SETD3Q86TU7 594 aaPredicted RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 TEX26Q8N6G2 289 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 CCNYL1Q8N7R7 359 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 ATAD1Q8NBU5 361 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 RP9Q8TA86 221 aaKnown RBP8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 GPR152Q8TDT2 470 aa8.39□□□□□ -1.07
SND1-IT1-201ENST00000623342 IGSF8Q969P0 613 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms