RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 RFXAPO00287 272 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 CACNG3O60359 315 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 BDNFP23560 247 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 HADHAP40939 763 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 IRF9Q00978 393 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 RAB33AQ14088 237 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 DLG2Q15700 870 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 TPGS2Q68CL5 300 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 ZNF781Q8N8C0 355 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 ZNF461Q8TAF7 563 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 SPPL2BQ8TCT7 592 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 IRGQQ8WZA9 623 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 CMTM5Q96DZ9 223 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 KLHL5Q96PQ7 755 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 RHOBTB2Q9BYZ6 727 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 WDCPQ9H6R7 721 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 CAB39LQ9H9S4 337 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 NDE1Q9NXR1 346 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 OR12D3Q9UGF7 316 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 TRANK1O15050 2925 aa17.66■□□□□ 0.42
FAM3A-222ENST00000621967 MYO9BQ13459 2157 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 ARHGAP42A6NI28 874 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 ATP9BO43861 1147 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 TRIM13O60858 407 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 LRIG2O94898 1065 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 CDH17Q12864 832 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 METTL21CQ5VZV1 264 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 NAPEPLDQ6IQ20 393 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 ATAD1Q8NBU5 361 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 SHKBP1Q8TBC3 707 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 UCMAQ8WVF2 138 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 TSGA13Q96PP4 275 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 GPR22Q99680 433 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 KIFC1Q9BW19 673 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 TKTL2Q9H0I9 626 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 COG4Q9H9E3 785 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 NMRAL1Q9HBL8 299 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 CHRAC1Q9NRG0 131 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 C20orf96Q9NUD7 363 aaPredicted RBP17.65■□□□□ 0.42
FAM3A-222ENST00000621967 NSMCE4AQ9NXX6 385 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 AFF4Q9UHB7 1163 aaKnown RBP17.65■□□□□ 0.42
FAM3A-222ENST00000621967 MID2Q9UJV3 735 aa17.65■□□□□ 0.42
FAM3A-222ENST00000621967 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.64■□□□□ 0.42
FAM3A-222ENST00000621967 PSMD3O43242 534 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 HSPA4LO95757 839 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 APOA4P06727 396 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 F7P08709 466 aaPredicted RBP17.64■□□□□ 0.42
FAM3A-222ENST00000621967 TUBP50607 506 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 RALGPS1Q5JS13 557 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 TMEM154Q6P9G4 183 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 SCML4Q8N228 414 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 ACVR1CQ8NER5 493 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 RDH11Q8TC12 318 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 SREK1Q8WXA9 508 aaKnown RBP17.64■□□□□ 0.42
FAM3A-222ENST00000621967 APOL2Q9BQE5 337 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 C1QTNF1Q9BXJ1 281 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 IARS2Q9NSE4 1012 aaKnown RBP17.64■□□□□ 0.42
FAM3A-222ENST00000621967 OXSMQ9NWU1 459 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 PPM1HQ9ULR3 514 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 NEU3Q9UQ49 428 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 ANKRD6Q9Y2G4 727 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 SNX10Q9Y5X0 201 aa17.64■□□□□ 0.42
FAM3A-222ENST00000621967 ABLIM3O94929 683 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 NMBRP28336 390 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 CRABP2P29373 138 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 GRIK1P39086 918 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 ABCG1P45844 678 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 PSEN1P49768 467 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 USP4Q13107 963 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 GSTA3Q16772 222 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 ANO4Q32M45 955 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 MGAT5BQ3V5L5 792 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 FSCBQ5H9T9 825 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 LINC00523Q86TU6 105 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 LCA5Q86VQ0 697 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 PHTF2Q8N3S3 785 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 EDEM1Q92611 657 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 GATA6Q92908 595 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 MRPL38Q96DV4 380 aaKnown RBP17.64■□□□□ 0.41
FAM3A-222ENST00000621967 SEPT5Q99719 369 aaPredicted RBP17.64■□□□□ 0.41
FAM3A-222ENST00000621967 S100A14Q9HCY8 104 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 DMAP1Q9NPF5 467 aaPredicted RBP17.64■□□□□ 0.41
FAM3A-222ENST00000621967 CDH22Q9UJ99 828 aa17.64■□□□□ 0.41
FAM3A-222ENST00000621967 MYO7AQ13402 2215 aa17.63■□□□□ 0.41
FAM3A-222ENST00000621967 BUD23O43709 281 aaKnown RBP17.63■□□□□ 0.41
FAM3A-222ENST00000621967 ZBTB14O43829 449 aa17.63■□□□□ 0.41
FAM3A-222ENST00000621967 GLUD1P00367 558 aa17.63■□□□□ 0.41
FAM3A-222ENST00000621967 JCHAINP01591 159 aa17.63■□□□□ 0.41
FAM3A-222ENST00000621967 ITGAXP20702 1163 aa17.63■□□□□ 0.41
FAM3A-222ENST00000621967 GLDCP23378 1020 aa17.63■□□□□ 0.41
FAM3A-222ENST00000621967 SP100P23497 879 aaPredicted RBP17.63■□□□□ 0.41
FAM3A-222ENST00000621967 DUSP4Q13115 394 aa17.63■□□□□ 0.41
FAM3A-222ENST00000621967 PRPSAP1Q14558 356 aa17.63■□□□□ 0.41
FAM3A-222ENST00000621967 SLC9B1Q4ZJI4 515 aa17.63■□□□□ 0.41
FAM3A-222ENST00000621967 ZNF697Q5TEC3 545 aa17.63■□□□□ 0.41
FAM3A-222ENST00000621967 TAC4Q86UU9 113 aa17.63■□□□□ 0.41
FAM3A-222ENST00000621967 ZC3HC1Q86WB0 502 aaKnown RBP17.63■□□□□ 0.41
FAM3A-222ENST00000621967 SCN4BQ8IWT1 228 aa17.63■□□□□ 0.41
FAM3A-222ENST00000621967 TMEM151AQ8N4L1 468 aa17.63■□□□□ 0.41
FAM3A-222ENST00000621967 SLC25A41Q8N5S1 370 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms