RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 CWC15Q9P013 229 aaKnown RBP17.37■□□□□ 0.37
HMGN3-203ENST00000620514 IFNKQ9P0W0 207 aa17.37■□□□□ 0.37
HMGN3-203ENST00000620514 GOLGA4Q13439 2230 aaKnown RBP17.36■□□□□ 0.37
HMGN3-203ENST00000620514 DFFAO00273 331 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 FPGTO14772 594 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 FFAR2O15552 330 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 BUB1BO60566 1050 aaPredicted RBP17.36■□□□□ 0.37
HMGN3-203ENST00000620514 SERPING1P05155 500 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 GIMD1P0DJR0 217 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 ZBED6P86452 979 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 CAMK2BQ13554 666 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 DPYSQ14117 519 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 SMTNL2Q2TAL5 461 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 TXNRD3NBQ6F5E7 133 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 ZSCAN30Q86W11 494 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 PROSER1Q86XN7 944 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 DCP2Q8IU60 420 aaKnown RBP17.36■□□□□ 0.37
HMGN3-203ENST00000620514 PSTKQ8IV42 348 aaKnown RBP17.36■□□□□ 0.37
HMGN3-203ENST00000620514 FAM174AQ8TBP5 190 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 ASB12Q8WXK4 309 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 ARHGEF26Q96DR7 871 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 BTBD6Q96KE9 485 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 NCAPGQ9BPX3 1015 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 CPEB1Q9BZB8 566 aaKnown RBP17.36■□□□□ 0.37
HMGN3-203ENST00000620514 DNAJC28Q9NX36 388 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 DONSONQ9NYP3 566 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 DKK3Q9UBP4 350 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 CAPN11Q9UMQ6 739 aa17.36■□□□□ 0.37
HMGN3-203ENST00000620514 BZW2Q9Y6E2 419 aaKnown RBP17.36■□□□□ 0.37
HMGN3-203ENST00000620514 TDRD6O60522 2096 aaKnown RBP17.36■□□□□ 0.37
HMGN3-203ENST00000620514 A0A087X0T9 212 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 GYPCP04921 128 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 FAM228BP0C875 321 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 CKMT2P17540 419 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 PCK1P35558 622 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 IGFALSP35858 605 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 ZNF211Q13398 564 aaPredicted RBP17.35■□□□□ 0.37
HMGN3-203ENST00000620514 PDE1CQ14123 709 aaPredicted RBP17.35■□□□□ 0.37
HMGN3-203ENST00000620514 VPS36Q86VN1 386 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 TSEN2Q8NCE0 465 aaKnown RBP17.35■□□□□ 0.37
HMGN3-203ENST00000620514 OR4C6Q8NH72 309 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 CXorf40AQ8TE69 158 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 HSPH1Q92598 858 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 CENPTQ96BT3 561 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 WRAP53Q9BUR4 548 aaKnown RBP17.35■□□□□ 0.37
HMGN3-203ENST00000620514 SUV39H2Q9H5I1 410 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 CCDC86Q9H6F5 360 aaKnown RBP17.35■□□□□ 0.37
HMGN3-203ENST00000620514 ZWILCHQ9H900 591 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 ETNK2Q9NVF9 386 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 KLF15Q9UIH9 416 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 RALYQ9UKM9 306 aaKnown RBP17.35■□□□□ 0.37
HMGN3-203ENST00000620514 WDFY3Q8IZQ1 3526 aa17.35■□□□□ 0.37
HMGN3-203ENST00000620514 SPTY2D1-AS1A0A0U1RR47 76 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 TRABD2BA6NFA1 517 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 PALMO75781 387 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 PRKCGP05129 697 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 C1SP09871 688 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 MYF5P13349 255 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 XPAP23025 273 aaPredicted RBP17.34■□□□□ 0.37
HMGN3-203ENST00000620514 RABIFP47224 123 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 HCAR3P49019 387 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 PFN3P60673 137 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 SEMG2Q02383 582 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 NFKBIBQ15653 356 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 SRLQ86TD4 932 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 TMPRSS12Q86WS5 348 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 ZSWIM9Q86XI8 627 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 CAMK1DQ8IU85 385 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 DENND6BQ8NEG7 585 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 IFT43Q96FT9 208 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 XPO4Q9C0E2 1151 aaKnown RBP17.34■□□□□ 0.37
HMGN3-203ENST00000620514 SP110Q9HB58 689 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 MBNL1Q9NR56 388 aaKnown RBP17.34■□□□□ 0.37
HMGN3-203ENST00000620514 IPO11Q9UI26 975 aaKnown RBP17.34■□□□□ 0.37
HMGN3-203ENST00000620514 COQ6Q9Y2Z9 468 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 LUC7L2Q9Y383 392 aaKnown RBP17.34■□□□□ 0.37
HMGN3-203ENST00000620514 ZFHX4Q86UP3 3567 aa17.34■□□□□ 0.37
HMGN3-203ENST00000620514 TSPAN11A1L157 253 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 H3BRJ5 948 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 MUSKO15146 869 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 NEBLO76041 1014 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 TM7SF2O76062 418 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 CSF2P04141 144 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 RARAP10276 462 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 AMPD1P23109 780 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 ACP1P24666 158 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 CASP14P31944 242 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 EIF2B5Q13144 721 aaKnown RBP17.33■□□□□ 0.36
HMGN3-203ENST00000620514 ACAP1Q15027 740 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 DPYSL2Q16555 572 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 UGP2Q16851 508 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 TMEM52BQ4KMG9 183 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 HES3Q5TGS1 186 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 POLNQ7Z5Q5 900 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 PARGQ86W56 976 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 TP53I13Q8NBR0 393 aaPredicted RBP17.33■□□□□ 0.36
HMGN3-203ENST00000620514 NSMCE3Q96MG7 304 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 NUP85Q9BW27 656 aa17.33■□□□□ 0.36
HMGN3-203ENST00000620514 CINPQ9BW66 212 aaPredicted RBP17.33■□□□□ 0.36
HMGN3-203ENST00000620514 PCDH12Q9NPG4 1184 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms