RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 RBM23Q86U06 439 aaKnown RBP20.83■□□□□ 0.93
CNTNAP3B-212ENST00000617422 CCDC117Q8IWD4 279 aaPredicted RBP20.83■□□□□ 0.93
CNTNAP3B-212ENST00000617422 TDRD5Q8NAT2 981 aaKnown RBP20.83■□□□□ 0.93
CNTNAP3B-212ENST00000617422 GRAMD1AQ96CP6 724 aa20.83■□□□□ 0.93
CNTNAP3B-212ENST00000617422 APOPT1Q96IL0 206 aa20.83■□□□□ 0.93
CNTNAP3B-212ENST00000617422 MAGEB18Q96M61 343 aa20.83■□□□□ 0.93
CNTNAP3B-212ENST00000617422 GCNAQ96QF7 691 aa20.83■□□□□ 0.93
CNTNAP3B-212ENST00000617422 HTATIP2Q9BUP3 242 aa20.83■□□□□ 0.93
CNTNAP3B-212ENST00000617422 TREX1Q9NSU2 369 aa20.83■□□□□ 0.93
CNTNAP3B-212ENST00000617422 SH3BP1Q9Y3L3 701 aa20.83■□□□□ 0.93
CNTNAP3B-212ENST00000617422 RB1P06400 928 aa20.83■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CR2P20023 1033 aa20.83■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CSKP41240 450 aa20.83■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ARCN1P48444 511 aaKnown RBP20.83■□□□□ 0.92
CNTNAP3B-212ENST00000617422 SERPINB9P50453 376 aa20.83■□□□□ 0.92
CNTNAP3B-212ENST00000617422 NCALDP61601 193 aa20.83■□□□□ 0.92
CNTNAP3B-212ENST00000617422 BNIP1Q12981 228 aa20.83■□□□□ 0.92
CNTNAP3B-212ENST00000617422 TPGS1Q6ZTW0 290 aa20.83■□□□□ 0.92
CNTNAP3B-212ENST00000617422 SH3RF2Q8TEC5 729 aa20.83■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ALKBH8Q96BT7 664 aaKnown RBP20.83■□□□□ 0.92
CNTNAP3B-212ENST00000617422 MCMBPQ9BTE3 642 aa20.83■□□□□ 0.92
CNTNAP3B-212ENST00000617422 IARS2Q9NSE4 1012 aaKnown RBP20.83■□□□□ 0.92
CNTNAP3B-212ENST00000617422 SEPT3Q9UH03 358 aa20.83■□□□□ 0.92
CNTNAP3B-212ENST00000617422 LSM7Q9UK45 103 aaKnown RBP20.83■□□□□ 0.92
CNTNAP3B-212ENST00000617422 SZT2Q5T011 3432 aa20.83■□□□□ 0.92
CNTNAP3B-212ENST00000617422 LPXNO60711 386 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PRKCGP05129 697 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ITGA2BP08514 1039 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PTPN2P17706 415 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 TAC1P20366 129 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 GMPRP36959 345 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CCNFP41002 786 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ETV4P43268 484 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 SERPINH1P50454 418 aaKnown RBP20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 SF3A3Q12874 501 aaKnown RBP eCLIP20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 NAB1Q13506 487 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CNGA3Q16281 694 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 LGSNQ5TDP6 509 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CMTM8Q8IZV2 173 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 MTBPQ96DY7 904 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ECT2Q9H8V3 914 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PRKAG3Q9UGI9 489 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ARHGAP26Q9UNA1 814 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ZWINTO95229 277 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PRAMEF12O95522 483 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 GBP2P32456 591 aaPredicted RBP20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 MAGEA10P43363 369 aaPredicted RBP20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 SEPT6Q14141 434 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 STRA8Q7Z7C7 330 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 APCDD1Q8J025 514 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ACVR1CQ8NER5 493 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PPHLN1Q8NEY8 458 aaKnown RBP20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 DDI1Q8WTU0 396 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 USP13Q92995 863 aaPredicted RBP20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ZNF707Q96C28 371 aaPredicted RBP20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ATXN7L3BQ96GX2 97 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ZSWIM3Q96MP5 696 aa20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CINPQ9BW66 212 aaPredicted RBP20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.82■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ANKRD36A6QL64 1941 aa20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 VAPBO95292 243 aa20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 MT-CO1P00395 513 aa20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 GP5P40197 560 aa20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 GALNT3Q14435 633 aa20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 E2F5Q15329 346 aa20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PRSS36Q5K4E3 855 aa20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 TIFABQ6ZNK6 161 aa20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CPXM2Q8N436 756 aa20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 TGS1Q96RS0 853 aaKnown RBP20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 TRIB3Q96RU7 358 aa20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 SRPK1Q96SB4 655 aaKnown RBP20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CPNE1Q99829 537 aa20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 SLC13A1Q9BZW2 595 aa20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PCMTD2Q9NV79 361 aa20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 VPS28Q9UK41 221 aa20.81■□□□□ 0.92
CNTNAP3B-212ENST00000617422 TPP1O14773 563 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ALADP13716 330 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 GABRB3P28472 473 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 SCNN1BP51168 640 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 IL9RQ01113 521 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 GPM6BQ13491 265 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CDH18Q13634 790 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 RNF43Q68DV7 783 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ZNF783Q6ZMS7 281 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 GRASPQ7Z6J2 395 aaPredicted RBP20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 MFN1Q8IWA4 741 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 FAM111AQ96PZ2 611 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 RBBP8Q99708 897 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 MRM3Q9HC36 420 aaKnown RBP20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 VPS51Q9UID3 782 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 KCTD3Q9Y597 815 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 TMCC1O94876 653 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CNTFP26441 200 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 HOXA9P31269 272 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 ERVK-21P61565 698 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 CDK18Q07002 472 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 PNPLA1Q8N8W4 532 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 FEM1CQ96JP0 617 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 SMIM14Q96QK8 99 aa20.8■□□□□ 0.92
CNTNAP3B-212ENST00000617422 GGT7Q9UJ14 662 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms