RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 COPS5Q92905 334 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 ASB9Q96DX5 294 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 SLC2A11Q9BYW1 496 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 TNFRSF12AQ9NP84 129 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 MYOZ2Q9NPC6 264 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 POLE4Q9NR33 117 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 IGSF9Q9P2J2 1179 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 MORF4L1Q9UBU8 362 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 EVLQ9UI08 416 aaPredicted RBP13.29□□□□□ -0.28
MSH6-214ENST00000616033 CROTQ9UKG9 612 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 PTPRFP10586 1907 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 CFAP99D6REC4 459 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 CBFA2T3O75081 653 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 HSDL1Q3SXM5 330 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 EFCAB12Q6NXP0 572 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 MICALL2Q8IY33 904 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 IPMKQ8NFU5 416 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 SPATA22Q8NHS9 363 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 CAPSLQ8WWF8 208 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 ZNF597Q96LX8 424 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 RPF2Q9H7B2 306 aaKnown RBP13.29□□□□□ -0.28
MSH6-214ENST00000616033 GBA2Q9HCG7 927 aaPredicted RBP13.29□□□□□ -0.28
MSH6-214ENST00000616033 SPAG4Q9NPE6 437 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 CACNA2D2Q9NY47 1150 aa13.29□□□□□ -0.28
MSH6-214ENST00000616033 KIAA1217Q5T5P2 1943 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 SERPINB7O75635 380 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 SUPT7LO94864 414 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 SLC4A1P02730 911 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 PFKMP08237 780 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 GRM5P41594 1212 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 C1QTNF8P60827 252 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 DNASE1L3Q13609 305 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 TMEM132DQ14C87 1099 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 IMPG1Q17R60 797 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 INSCQ1MX18 579 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 FAM83EQ2M2I3 478 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 NBPF12Q5TAG4 269 aaPredicted RBP13.28□□□□□ -0.28
MSH6-214ENST00000616033 LYSMD3Q7Z3D4 306 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 LDB1Q86U70 411 aaPredicted RBP13.28□□□□□ -0.28
MSH6-214ENST00000616033 DDIASQ8IXT1 998 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 BORCS5Q969J3 196 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 MAELQ96JY0 434 aaKnown RBP13.28□□□□□ -0.28
MSH6-214ENST00000616033 PCYT2Q99447 389 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 FANCEQ9HB96 536 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 DUS2Q9NX74 493 aaKnown RBP13.28□□□□□ -0.28
MSH6-214ENST00000616033 ACOT9Q9Y305 439 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 A0A087WZ62 844 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 M0QYT0 321 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 ALDH3B2P48448 385 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 EFNA5P52803 228 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 BCAT1P54687 386 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 STX5Q13190 355 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 CYP51A1Q16850 503 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 ZBED5Q49AG3 693 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 GJC2Q5T442 439 aaPredicted RBP13.28□□□□□ -0.28
MSH6-214ENST00000616033 ILDR2Q71H61 639 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 OTOP3Q7RTS5 596 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 CEP97Q8IW35 865 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 LSMEM2Q8N112 164 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 LZTR1Q8N653 840 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 HDAC11Q96DB2 347 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 CDHR1Q96JP9 859 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 FDXACB1Q9BRP7 624 aaPredicted RBP13.28□□□□□ -0.28
MSH6-214ENST00000616033 HERC2P3Q9BVR0 1158 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 LTB4R2Q9NPC1 389 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 SLC27A5Q9Y2P5 690 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 FADS3Q9Y5Q0 445 aa13.28□□□□□ -0.28
MSH6-214ENST00000616033 PTGES3LE9PB15 166 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 ALDH1A2O94788 518 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 BCL10O95999 233 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 NFKB1P19838 968 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 OXTRP30559 389 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 GMPSP49915 693 aaPredicted RBP13.27□□□□□ -0.28
MSH6-214ENST00000616033 PCSK7Q16549 785 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 SCIMPQ6UWF3 145 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 RTP4Q96DX8 246 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 AASDHPPTQ9NRN7 309 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 EXD2Q9NVH0 621 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 DPP3Q9NY33 737 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 ZNF831Q5JPB2 1677 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 SPATA31C2B4DYI2 1134 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 SDHDO14521 159 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 AURKAO14965 403 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 GABBR2O75899 941 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 SNAP29O95721 258 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 MT-CYBP00156 380 aaPredicted RBP13.27□□□□□ -0.28
MSH6-214ENST00000616033 HMGB2P26583 209 aaKnown RBP13.27□□□□□ -0.28
MSH6-214ENST00000616033 TKTP29401 623 aaKnown RBP13.27□□□□□ -0.28
MSH6-214ENST00000616033 RAD23AP54725 363 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 IL1RL1Q01638 556 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 MERTKQ12866 999 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 SURF1Q15526 300 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 TXNDC5Q8NBS9 432 aaKnown RBP13.27□□□□□ -0.28
MSH6-214ENST00000616033 TBC1D15Q8TC07 691 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 RNF139Q8WU17 664 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 TCF12Q99081 682 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 HIPK3Q9H422 1215 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 GID8Q9NWU2 228 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 PCDHGA3Q9Y5H0 932 aa13.27□□□□□ -0.28
MSH6-214ENST00000616033 MAFBQ9Y5Q3 323 aaPredicted RBP13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms