RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 KLHL11Q9NVR0 708 aa19.55■□□□□ 0.72
SGMS1-208ENST00000608287 TMEM248Q9NWD8 314 aa19.55■□□□□ 0.72
SGMS1-208ENST00000608287 ARHGAP20Q9P2F6 1191 aa19.55■□□□□ 0.72
SGMS1-208ENST00000608287 DNAI1Q9UI46 699 aa19.55■□□□□ 0.72
SGMS1-208ENST00000608287 HS3ST2Q9Y278 367 aa19.55■□□□□ 0.72
SGMS1-208ENST00000608287 AHCTF1Q8WYP5 2266 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 A0A087X0T9 212 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 CREB3O43889 395 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 BNIP3LO60238 219 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 IL1BP01584 269 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 TPM1P09493 284 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 FAM228BP0C875 321 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 SRCP12931 536 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 MAPKAPK2P49137 400 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 PPP2CBP62714 309 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 PPP2CAP67775 309 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 SKOR1P84550 965 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 ISXQ2M1V0 245 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 Q6ZVU0 165 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 NLRP14Q86W24 1093 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 VSTM4Q8IW00 320 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 SLC25A45Q8N413 288 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 OR8D1Q8WZ84 308 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 IFT43Q96FT9 208 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 CCNL2Q96S94 520 aaPredicted RBP19.54■□□□□ 0.72
SGMS1-208ENST00000608287 EPAS1Q99814 870 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 RETREG1Q9H6L5 497 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 NDFIP2Q9NV92 336 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 SATB2Q9UPW6 733 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 NEU3Q9UQ49 428 aa19.54■□□□□ 0.72
SGMS1-208ENST00000608287 DOPEY2Q9Y3R5 2298 aa19.53■□□□□ 0.72
SGMS1-208ENST00000608287 ITGB2P05107 769 aa19.53■□□□□ 0.72
SGMS1-208ENST00000608287 EPHB2P29323 1055 aa19.53■□□□□ 0.72
SGMS1-208ENST00000608287 ACVRL1P37023 503 aa19.53■□□□□ 0.72
SGMS1-208ENST00000608287 CCDC122Q5T0U0 273 aa19.53■□□□□ 0.72
SGMS1-208ENST00000608287 RETSATQ6NUM9 610 aa19.53■□□□□ 0.72
SGMS1-208ENST00000608287 ALKBH5Q6P6C2 394 aaKnown RBP19.53■□□□□ 0.72
SGMS1-208ENST00000608287 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.53■□□□□ 0.72
SGMS1-208ENST00000608287 OR8K1Q8NGG5 319 aa19.53■□□□□ 0.72
SGMS1-208ENST00000608287 FAM174AQ8TBP5 190 aa19.53■□□□□ 0.72
SGMS1-208ENST00000608287 FNIP1Q8TF40 1166 aa19.53■□□□□ 0.72
SGMS1-208ENST00000608287 TRIM4Q9C037 500 aa19.53■□□□□ 0.72
SGMS1-208ENST00000608287 THAP2Q9H0W7 228 aa19.53■□□□□ 0.72
SGMS1-208ENST00000608287 GPATCH2LQ9NWQ4 482 aa19.53■□□□□ 0.72
SGMS1-208ENST00000608287 PCSK1NQ9UHG2 260 aa19.53■□□□□ 0.72
SGMS1-208ENST00000608287 AP4E1Q9UPM8 1137 aa19.53■□□□□ 0.72
SGMS1-208ENST00000608287 K7ERQ8 282 aa19.52■□□□□ 0.72
SGMS1-208ENST00000608287 FFAR2O15552 330 aa19.52■□□□□ 0.72
SGMS1-208ENST00000608287 PLRG1O43660 514 aaKnown RBP19.52■□□□□ 0.72
SGMS1-208ENST00000608287 TCEA3O75764 348 aa19.52■□□□□ 0.72
SGMS1-208ENST00000608287 HNRNPH3P31942 346 aaKnown RBP19.52■□□□□ 0.72
SGMS1-208ENST00000608287 ETFBP38117 255 aa19.52■□□□□ 0.72
SGMS1-208ENST00000608287 EIF4A3P38919 411 aaKnown RBP19.52■□□□□ 0.72
SGMS1-208ENST00000608287 CCDC15Q0P6D6 951 aa19.52■□□□□ 0.72
SGMS1-208ENST00000608287 TSR1Q2NL82 804 aaKnown RBP19.52■□□□□ 0.72
SGMS1-208ENST00000608287 ARFGAP1Q8N6T3 406 aa19.52■□□□□ 0.72
SGMS1-208ENST00000608287 WDR48Q8TAF3 677 aa19.52■□□□□ 0.72
SGMS1-208ENST00000608287 APOLD1Q96LR9 279 aa19.52■□□□□ 0.72
SGMS1-208ENST00000608287 CCDC114Q96M63 670 aa19.52■□□□□ 0.72
SGMS1-208ENST00000608287 STARD5Q9NSY2 213 aa19.52■□□□□ 0.72
SGMS1-208ENST00000608287 FARP1Q9Y4F1 1045 aaPredicted RBP19.52■□□□□ 0.72
SGMS1-208ENST00000608287 UBR5O95071 2799 aaPredicted RBP19.51■□□□□ 0.71
SGMS1-208ENST00000608287 SMAD6O43541 496 aaKnown RBP19.51■□□□□ 0.71
SGMS1-208ENST00000608287 PRPSAP2O60256 369 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 RAMP2O60895 175 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 ZMPSTE24O75844 475 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 PIAS2O75928 621 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 THEGLP0DJG4 465 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 MIPP30301 263 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 MAT2AP31153 395 aaKnown RBP19.51■□□□□ 0.71
SGMS1-208ENST00000608287 CLCN6P51797 869 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 SLC20A2Q08357 652 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 POLD3Q15054 466 aaPredicted RBP19.51■□□□□ 0.71
SGMS1-208ENST00000608287 ERMARDQ5T6L9 678 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 RTL3Q8N8U3 475 aaKnown RBP19.51■□□□□ 0.71
SGMS1-208ENST00000608287 WDR36Q8NI36 951 aaKnown RBP19.51■□□□□ 0.71
SGMS1-208ENST00000608287 ARHGEF2Q92974 986 aaKnown RBP19.51■□□□□ 0.71
SGMS1-208ENST00000608287 FAM131CQ96AQ9 280 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 PEBP4Q96S96 227 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 DNAJC7Q99615 494 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 MAGEH1Q9H213 219 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 DHX35Q9H5Z1 703 aaKnown RBP19.51■□□□□ 0.71
SGMS1-208ENST00000608287 CATSPERBQ9H7T0 1116 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 PREBQ9HCU5 417 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 ZNHIT6Q9NWK9 470 aaKnown RBP19.51■□□□□ 0.71
SGMS1-208ENST00000608287 ATXN7L1Q9ULK2 861 aaPredicted RBP19.51■□□□□ 0.71
SGMS1-208ENST00000608287 HPCAL4Q9UM19 191 aa19.51■□□□□ 0.71
SGMS1-208ENST00000608287 CDRT15L2A8MXV6 281 aa19.5■□□□□ 0.71
SGMS1-208ENST00000608287 C1QTNF3-AMACRE9PGA6 284 aa19.5■□□□□ 0.71
SGMS1-208ENST00000608287 MCF2LO15068 1137 aa19.5■□□□□ 0.71
SGMS1-208ENST00000608287 ALOX15BO15296 676 aa19.5■□□□□ 0.71
SGMS1-208ENST00000608287 SERPINH1P50454 418 aaKnown RBP19.5■□□□□ 0.71
SGMS1-208ENST00000608287 TPI1P60174 286 aa19.5■□□□□ 0.71
SGMS1-208ENST00000608287 ARF5P84085 180 aa19.5■□□□□ 0.71
SGMS1-208ENST00000608287 C22orf39Q6P5X5 142 aa19.5■□□□□ 0.71
SGMS1-208ENST00000608287 RBM44Q6ZP01 1051 aaKnown RBP19.5■□□□□ 0.71
SGMS1-208ENST00000608287 CLEC14AQ86T13 490 aa19.5■□□□□ 0.71
SGMS1-208ENST00000608287 ZNF354CQ86Y25 554 aa19.5■□□□□ 0.71
SGMS1-208ENST00000608287 IFI44Q8TCB0 444 aa19.5■□□□□ 0.71
SGMS1-208ENST00000608287 NCAPGQ9BPX3 1015 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms