RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 CKMT2P17540 419 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 XPAP23025 273 aaPredicted RBP16.56■□□□□ 0.24
TUBE1-206ENST00000603722 IL1R2P27930 398 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 PCK1P35558 622 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 ZBED6P86452 979 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 PDE1CQ14123 709 aaPredicted RBP16.56■□□□□ 0.24
TUBE1-206ENST00000603722 FZD2Q14332 565 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 PROX2Q3B8N5 592 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 ZSCAN23Q3MJ62 389 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 HS1BP3Q53T59 392 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 AFMIDQ63HM1 303 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 ARHGAP36Q6ZRI8 547 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 PARGQ86W56 976 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 TMPRSS12Q86WS5 348 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 DCP2Q8IU60 420 aaKnown RBP16.56■□□□□ 0.24
TUBE1-206ENST00000603722 DENND6BQ8NEG7 585 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 OR4C6Q8NH72 309 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 ASB12Q8WXK4 309 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 HSPH1Q92598 858 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 IFT43Q96FT9 208 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 WRAP53Q9BUR4 548 aaKnown RBP16.56■□□□□ 0.24
TUBE1-206ENST00000603722 CPEB1Q9BZB8 566 aaKnown RBP16.56■□□□□ 0.24
TUBE1-206ENST00000603722 THAP2Q9H0W7 228 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 ZWILCHQ9H900 591 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.56■□□□□ 0.24
TUBE1-206ENST00000603722 CWC15Q9P013 229 aaKnown RBP16.56■□□□□ 0.24
TUBE1-206ENST00000603722 IFNKQ9P0W0 207 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 IPO11Q9UI26 975 aaKnown RBP16.56■□□□□ 0.24
TUBE1-206ENST00000603722 CAPN11Q9UMQ6 739 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 IGF2RP11717 2491 aa16.56■□□□□ 0.24
TUBE1-206ENST00000603722 SPTY2D1-AS1A0A0U1RR47 76 aa16.55■□□□□ 0.24
TUBE1-206ENST00000603722 TAF4O00268 1085 aa16.55■□□□□ 0.24
TUBE1-206ENST00000603722 PALMO75781 387 aa16.55■□□□□ 0.24
TUBE1-206ENST00000603722 TM7SF2O76062 418 aa16.55■□□□□ 0.24
TUBE1-206ENST00000603722 GYPCP04921 128 aa16.55■□□□□ 0.24
TUBE1-206ENST00000603722 PTMSP20962 102 aa16.55■□□□□ 0.24
TUBE1-206ENST00000603722 IGFALSP35858 605 aa16.55■□□□□ 0.24
TUBE1-206ENST00000603722 RGRP47804 291 aa16.55■□□□□ 0.24
TUBE1-206ENST00000603722 ZNF135P52742 658 aaPredicted RBP16.55■□□□□ 0.24
TUBE1-206ENST00000603722 PFN3P60673 137 aa16.55■□□□□ 0.24
TUBE1-206ENST00000603722 ZNF211Q13398 564 aaPredicted RBP16.55■□□□□ 0.24
TUBE1-206ENST00000603722 DPYSQ14117 519 aa16.55■□□□□ 0.24
TUBE1-206ENST00000603722 TPRG1LQ5T0D9 272 aa16.55■□□□□ 0.24
TUBE1-206ENST00000603722 CFAP58Q5T655 872 aa16.55■□□□□ 0.24
TUBE1-206ENST00000603722 HES3Q5TGS1 186 aa16.55■□□□□ 0.24
TUBE1-206ENST00000603722 TSEN2Q8NCE0 465 aaKnown RBP16.55■□□□□ 0.24
TUBE1-206ENST00000603722 BTBD6Q96KE9 485 aa16.55■□□□□ 0.24
TUBE1-206ENST00000603722 CINPQ9BW66 212 aaPredicted RBP16.55■□□□□ 0.24
TUBE1-206ENST00000603722 PCNX2A6NKB5 2137 aa16.55■□□□□ 0.24
TUBE1-206ENST00000603722 COL5A1P20908 1838 aaPredicted RBP16.54■□□□□ 0.24
TUBE1-206ENST00000603722 ZZEF1O43149 2961 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 A0A087X0T9 212 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 TSPAN11A1L157 253 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 TRABD2BA6NFA1 517 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 H3BRJ5 948 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 FAM228BP0C875 321 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 GIMD1P0DJR0 217 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 ALPPL2P10696 532 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 CDK4P11802 303 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 JUPP14923 745 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 ACP1P24666 158 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 HNF1BP35680 557 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 HNRNPKP61978 463 aaKnown RBP eCLIP16.54■□□□□ 0.24
TUBE1-206ENST00000603722 DAB2P98082 770 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 ILKQ13418 452 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 CAMK2BQ13554 666 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 GRM3Q14832 879 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 ACAP1Q15027 740 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 NFKBIBQ15653 356 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 DPYSL2Q16555 572 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 TP53INP2Q8IXH6 220 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 IQCDQ96DY2 449 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 C1QTNF7Q9BXJ2 289 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 SUV39H2Q9H5I1 410 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 PCDH12Q9NPG4 1184 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 ANAPC7Q9UJX3 599 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 RALYQ9UKM9 306 aaKnown RBP16.54■□□□□ 0.24
TUBE1-206ENST00000603722 LUC7L2Q9Y383 392 aaKnown RBP16.54■□□□□ 0.24
TUBE1-206ENST00000603722 DOCK4Q8N1I0 1966 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 CACNA1BQ00975 2339 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 LAMA5O15230 3695 aa16.54■□□□□ 0.24
TUBE1-206ENST00000603722 H3BM21 787 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 BUB1BO60566 1050 aaPredicted RBP16.53■□□□□ 0.24
TUBE1-206ENST00000603722 NEBLO76041 1014 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 CSF2P04141 144 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 PRKCGP05129 697 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 NME1P15531 152 aaKnown RBP16.53■□□□□ 0.24
TUBE1-206ENST00000603722 ARL4AP40617 200 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 HCAR3P49019 387 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 SUOXP51687 545 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 IL10RBQ08334 325 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 ELP6Q0PNE2 266 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 PIGHQ14442 188 aaPredicted RBP16.53■□□□□ 0.24
TUBE1-206ENST00000603722 RFTN1Q14699 578 aaPredicted RBP16.53■□□□□ 0.24
TUBE1-206ENST00000603722 UGP2Q16851 508 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 TXNRD3NBQ6F5E7 133 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 ERAP2Q6P179 960 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 BRAT1Q6PJG6 821 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 ZSWIM9Q86XI8 627 aa16.53■□□□□ 0.24
TUBE1-206ENST00000603722 CAMK1DQ8IU85 385 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms