RNA–Protein interactions for RNA: ENST00000599564.5

GRAMD1A-211, Transcript of GRAM domain containing 1A, humanhuman

TSL 5 BASIC

Gene GRAMD1A, Length 2,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-211ENST00000599564 SNAP29O95721 258 aa16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 SNRPB2P08579 225 aaKnown RBP16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 NMBRP28336 390 aa16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 PSMD8P48556 350 aa16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 LAMTOR4Q0VGL1 99 aa16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 CAPRIN1Q14444 709 aaKnown RBP16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 HSDL1Q3SXM5 330 aa16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 ZNF618Q5T7W0 954 aa16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 CADM3Q8N126 398 aa16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 TXNDC5Q8NBS9 432 aaKnown RBP16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 STYXQ8WUJ0 223 aa16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 NGLY1Q96IV0 654 aa16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 CSF3RQ99062 836 aa16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 POMKQ9H5K3 350 aa16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 MRPL40Q9NQ50 206 aaKnown RBP16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 BFARQ9NZS9 450 aa16.94■□□□□ 0.3
GRAMD1A-211ENST00000599564 TANC1Q9C0D5 1861 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 DPYSL4O14531 572 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 RPS3AP61247 264 aaKnown RBP16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 SURF1Q15526 300 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 BCL2A1Q16548 175 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 ANO4Q32M45 955 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 ZIK1Q3SY52 487 aaPredicted RBP16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 ATF7IP2Q5U623 682 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 LCLAT1Q6UWP7 414 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 RNF135Q8IUD6 432 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 ANKRD52Q8NB46 1076 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 NDRG1Q92597 394 aaKnown RBP16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 ITPKCQ96DU7 683 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 HPDLQ96IR7 371 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 SNX27Q96L92 541 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 GLT1D1Q96MS3 346 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 ATAD3AQ9NVI7 634 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 MAP3K20Q9NYL2 800 aaKnown RBP16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 IFT80Q9P2H3 777 aaPredicted RBP16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 MID2Q9UJV3 735 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 TRPC5Q9UL62 973 aaPredicted RBP16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 CPQQ9Y646 472 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 VWA5AO00534 786 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 TOR1BO14657 336 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 NRP2O60462 931 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 LCP1P13796 627 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 YBX3P16989 372 aaKnown RBP eCLIP16.93■□□□□ 0.34e-6■□□□□ 8.3
GRAMD1A-211ENST00000599564 ARL4AP40617 200 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 FKBP1AP62942 108 aaKnown RBP16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 DNASE1L3Q13609 305 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 SOWAHAQ2M3V2 549 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 MPZL3Q6UWV2 235 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 TMEM135Q86UB9 458 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 IFNEQ86WN2 208 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 CEP97Q8IW35 865 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 STARD8Q92502 1023 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 SEPT8Q92599 483 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 KCNN1Q92952 543 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 MAELQ96JY0 434 aaKnown RBP16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 KLHL25Q9H0H3 589 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 CCM2LQ9NUG4 571 aaPredicted RBP16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 GIT1Q9Y2X7 761 aa16.93■□□□□ 0.3
GRAMD1A-211ENST00000599564 TRPC5OSA6NMA1 111 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 NME4O00746 187 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 HCRTO43612 131 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 CLASP2O75122 1294 aaKnown RBP16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 CLPXO76031 633 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 HSPA8P11142 646 aaKnown RBP16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 MTHFD1P11586 935 aaKnown RBP16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 CHRM3P20309 590 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 PGS1Q32NB8 556 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 RETREG3Q86VR2 466 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 ZNF354CQ86Y25 554 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 RAVER1Q8IY67 606 aaKnown RBP16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 DHRSXQ8N5I4 330 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 C7orf31Q8N865 590 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 ZC3H15Q8WU90 426 aaKnown RBP16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 C17orf50Q8WW18 174 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 SNX19Q92543 992 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 PCYT2Q99447 389 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 SIAEQ9HAT2 523 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 EIF2B3Q9NR50 452 aaKnown RBP16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 ARMC1Q9NVT9 282 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 TMEM98Q9Y2Y6 226 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 SPATA31C2B4DYI2 1134 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 PABPC1P11940 636 aaKnown RBP16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 FASP25445 335 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 TTKP33981 857 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 POU5F1BQ06416 359 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 CTBP1Q13363 440 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 DENND6AQ8IWF6 608 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 DDIASQ8IXT1 998 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 PCYOX1LQ8NBM8 494 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 TRAPPC12Q8WVT3 735 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 HDAC10Q969S8 669 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 ALPK1Q96QP1 1244 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 C1orf50Q9BV19 199 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 SPON1Q9HCB6 807 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 AGPAT4Q9NRZ5 378 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 ANKRD31Q8N7Z5 1873 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 ZNF638Q14966 1978 aaKnown RBP16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 TRIM64A6NGJ6 449 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 PGK1P00558 417 aa16.92■□□□□ 0.3
GRAMD1A-211ENST00000599564 APOA4P06727 396 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms