RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 C16orf96A6NNT2 1141 aa22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 URI1O94763 535 aaPredicted RBP22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 C7P10643 843 aa22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 OXTRP30559 389 aa22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 CD68P34810 354 aaPredicted RBP22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 GDF10P55107 478 aa22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 MAP7D1Q3KQU3 841 aa22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 FBXL19Q6PCT2 694 aa22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 ARHGEF18Q6ZSZ5 1173 aa22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 ERN2Q76MJ5 926 aaKnown RBP22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 KBTBD6Q86V97 674 aa22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 FAM160A2Q8N612 972 aaPredicted RBP22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 CCDC89Q8N998 374 aa22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 NELL1Q92832 810 aa22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 VOPP1Q96AW1 172 aa22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 IMP4Q96G21 291 aaKnown RBP22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 RBM15Q96T37 977 aaKnown RBP eCLIP22.34■■□□□ 1.174e-6■□□□□ 8.6
CHMP2A-204ENST00000597848 NEUROG2Q9H2A3 272 aa22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 SERGEFQ9UGK8 458 aa22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 RAI2Q9Y5P3 530 aa22.34■■□□□ 1.17
CHMP2A-204ENST00000597848 MAP3K13O43283 966 aa22.33■■□□□ 1.17
CHMP2A-204ENST00000597848 OPHN1O60890 802 aa22.33■■□□□ 1.17
CHMP2A-204ENST00000597848 GCATO75600 419 aa22.33■■□□□ 1.17
CHMP2A-204ENST00000597848 XPAP23025 273 aaPredicted RBP22.33■■□□□ 1.17
CHMP2A-204ENST00000597848 DRD3P35462 400 aa22.33■■□□□ 1.17
CHMP2A-204ENST00000597848 ACTN2P35609 894 aa22.33■■□□□ 1.17
CHMP2A-204ENST00000597848 P2RY2P41231 377 aa22.33■■□□□ 1.17
CHMP2A-204ENST00000597848 TTC7BQ86TV6 843 aa22.33■■□□□ 1.17
CHMP2A-204ENST00000597848 FRMD1Q8N878 549 aa22.33■■□□□ 1.17
CHMP2A-204ENST00000597848 PRSS33Q8NF86 280 aa22.33■■□□□ 1.17
CHMP2A-204ENST00000597848 ATL2Q8NHH9 583 aa22.33■■□□□ 1.17
CHMP2A-204ENST00000597848 KIF18AQ8NI77 898 aa22.33■■□□□ 1.17
CHMP2A-204ENST00000597848 HDAC8Q9BY41 377 aa22.33■■□□□ 1.17
CHMP2A-204ENST00000597848 PDE2AO00408 941 aaPredicted RBP22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 PHF2O75151 1096 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 RPP40O75818 363 aaKnown RBP22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 MMP2P08253 660 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 CA4P22748 312 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 CD6P30203 668 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 COILP38432 576 aaPredicted RBP22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 NEK3P51956 506 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 SKOR1P84550 965 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 LMNB2Q03252 620 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 TRAF2Q12933 501 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 SRSF5Q13243 272 aaKnown RBP22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 CYP1B1Q16678 543 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 PARS2Q7L3T8 475 aaKnown RBP22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 PRPF39Q86UA1 669 aaKnown RBP22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 C12orf50Q8NA57 414 aaPredicted RBP22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 OR14C36Q8NHC7 312 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 SPATA22Q8NHS9 363 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 HCAR2Q8TDS4 363 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 TOE1Q96GM8 510 aaKnown RBP22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 FCRL5Q96RD9 977 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 BTBD1Q9H0C5 482 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 GBA3Q9H227 469 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 UBP1Q9NZI7 540 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 DKK3Q9UBP4 350 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 FZD4Q9ULV1 537 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 PCDHGA2Q9Y5H1 932 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 ZNF318Q5VUA4 2279 aa22.32■■□□□ 1.16
CHMP2A-204ENST00000597848 IGHV1OR15-9A0A0B4J2B8 117 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 TRAFD1O14545 582 aaPredicted RBP22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 SOCS5O75159 536 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 NDUFS2O75306 463 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 PMPCBO75439 489 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 IGLV3-19P01714 112 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 ETS1P14921 441 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 PRPSAP1Q14558 356 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 IHHQ14623 411 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 P3H1Q32P28 736 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 ARMC12Q5T9G4 340 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 TTC27Q6P3X3 843 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 BRAT1Q6PJG6 821 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 CCDC137Q6PK04 289 aaKnown RBP22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 TAB3Q8N5C8 712 aaPredicted RBP22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 GAB3Q8WWW8 586 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 RTP4Q96DX8 246 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 WSB2Q9NYS7 404 aaPredicted RBP22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 FAM153AQ9UHL3 310 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 CHKBQ9Y259 395 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 PCDHB9Q9Y5E1 797 aa22.31■■□□□ 1.16
CHMP2A-204ENST00000597848 A0A1W2PQ67 120 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 FAM47DPA6NHR8 397 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 HTRA2O43464 458 aaPredicted RBP22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 HRO43593 1189 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 MT-CYBP00156 380 aaPredicted RBP22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 ADRB3P13945 408 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 TIMP2P16035 220 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 PSMB4P28070 264 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 ACSL1P33121 698 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 CNR2P34972 360 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 POLR2LP62875 67 aaKnown RBP22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 PCSK7Q16549 785 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 PARP6Q2NL67 630 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 PIP5KL1Q5T9C9 394 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 AGBL4Q5VU57 503 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 SLC36A4Q6YBV0 504 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 CEP68Q76N32 757 aa22.3■■□□□ 1.16
CHMP2A-204ENST00000597848 KDELC2Q7Z4H8 507 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms