RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CEP44Q9C0F1 390 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 TKTL2Q9H0I9 626 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 RETREG1Q9H6L5 497 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 THSD1Q9NS62 852 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 LIMA1Q9UHB6 759 aaKnown RBP9.62□□□□□ -0.87
BRCA1-226ENST00000591534 OR51B4Q9Y5P0 310 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 GPC6Q9Y625 555 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-226ENST00000591534 PTPRBP23467 1997 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 KNL1Q8NG31 2342 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 NUMA1Q14980 2115 aa9.62□□□□□ -0.87
BRCA1-226ENST00000591534 CXorf51AA0A1B0GTR3 108 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 ILVBLA1L0T0 632 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 FPGTO14772 594 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 FFAR2O15552 330 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 OPA1O60313 960 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 PIAS2O75928 621 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 THBS1P07996 1170 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 CCDC172P0C7W6 258 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 PNMA6AP0CW24 399 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-226ENST00000591534 PRLRP16471 622 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 RBMS1P29558 406 aaKnown RBP9.61□□□□□ -0.87
BRCA1-226ENST00000591534 LSSP48449 732 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 CXCR3P49682 368 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 NUMBP49757 651 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 METAP1P53582 386 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 CLDN6P56747 220 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 TAS2R38P59533 333 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 RNASE9P60153 205 aaKnown RBP9.61□□□□□ -0.87
BRCA1-226ENST00000591534 CXADRP78310 365 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 PITX1P78337 314 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-226ENST00000591534 PTSQ03393 145 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 TLE3Q04726 772 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 NCAPHQ15003 741 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 SLC25A52Q3SY17 297 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 TAF1BQ53T94 588 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-226ENST00000591534 SPECC1LQ69YQ0 1117 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 DPY19L2P1Q6NXN4 242 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 ZCCHC8Q6NZY4 707 aaKnown RBP9.61□□□□□ -0.87
BRCA1-226ENST00000591534 Q6ZSR6 202 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 TMC6Q7Z403 805 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 PTAR1Q7Z6K3 402 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-226ENST00000591534 ABI3BPQ7Z7G0 1075 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 PASD1Q8IV76 773 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 CNGA4Q8IV77 575 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 TXLNBQ8N3L3 684 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 PCDH20Q8N6Y1 951 aaKnown RBP9.61□□□□□ -0.87
BRCA1-226ENST00000591534 WDR48Q8TAF3 677 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 MAPK15Q8TD08 544 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 BTN2A2Q8WVV5 523 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 SHC3Q92529 594 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 RAB7BQ96AH8 199 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 ARHGEF26Q96DR7 871 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 PGAP3Q96FM1 320 aaPredicted RBP9.61□□□□□ -0.87
BRCA1-226ENST00000591534 WBP1Q96G27 269 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 CRELD1Q96HD1 420 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 HAPLN3Q96S86 360 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 TUBGCP2Q9BSJ2 902 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 SPON2Q9BUD6 331 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 SLC17A9Q9BYT1 436 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 DPH1Q9BZG8 443 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 POLR1BQ9H9Y6 1135 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 SIX2Q9NPC8 291 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 SAMSN1Q9NSI8 373 aaKnown RBP9.61□□□□□ -0.87
BRCA1-226ENST00000591534 DNAJC28Q9NX36 388 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 ARHGEF38Q9NXL2 777 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 VPS51Q9UID3 782 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 HPCAL4Q9UM19 191 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 KCNMB2Q9Y691 235 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 CSNK1G3Q9Y6M4 447 aa9.61□□□□□ -0.87
BRCA1-226ENST00000591534 GOLGA4Q13439 2230 aaKnown RBP9.6□□□□□ -0.87
BRCA1-226ENST00000591534 DRGXA6NNA5 263 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 PES1O00541 588 aaKnown RBP9.6□□□□□ -0.87
BRCA1-226ENST00000591534 NEMP1O14524 444 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 CCP110O43303 1012 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 TSPAN6O43657 245 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 AP1G1O43747 822 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 USP12O75317 370 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 LEFTY1O75610 366 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 MT-CO1P00395 513 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 CSF2P04141 144 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 RRM1P23921 792 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 ITGB7P26010 798 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 SULT1E1P49888 294 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 DNA2P51530 1060 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 ZNF75DP51815 510 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 GABREP78334 506 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 PTK2BQ14289 1009 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 POLD3Q15054 466 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-226ENST00000591534 ARL13BQ3SXY8 428 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 CARD16Q5EG05 197 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 MIIPQ5JXC2 388 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 CDCP2Q5VXM1 449 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 C22orf39Q6P5X5 142 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 KYAT3Q6YP21 454 aaKnown RBP9.6□□□□□ -0.87
BRCA1-226ENST00000591534 C14orf80Q86SX3 495 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 PARGQ86W56 976 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 ERICH1Q86X53 443 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 SPACA3Q8IXA5 215 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 WDTC1Q8N5D0 677 aa9.6□□□□□ -0.87
BRCA1-226ENST00000591534 OR13H1Q8NG92 308 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms