RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 KYQ8NBH2 561 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 C2orf15Q8WU43 125 aaKnown RBP8.11□□□□□ -1.11
SMAD4-209ENST00000589941 RNF26Q9BY78 433 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-209ENST00000589941 DPH1Q9BZG8 443 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 XPO4Q9C0E2 1151 aaKnown RBP8.11□□□□□ -1.11
SMAD4-209ENST00000589941 CAAP1Q9H8G2 361 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 ITM2CQ9NQX7 267 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 KCNJ14Q9UNX9 436 aa8.11□□□□□ -1.11
SMAD4-209ENST00000589941 LAD1O00515 517 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 GSTA4O15217 222 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 HOXC11O43248 304 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-209ENST00000589941 TRIM13O60858 407 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 USP12O75317 370 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 ZNF202O95125 648 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 OLFM2O95897 454 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 IGLV3-19P01714 112 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 ACAT1P24752 427 aaKnown RBP8.1□□□□□ -1.11
SMAD4-209ENST00000589941 TNFRSF8P28908 595 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 EPHA8P29322 1005 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-209ENST00000589941 ACSL1P33121 698 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 THBS2P35442 1172 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 EFNA5P52803 228 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 COPAP53621 1224 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 RCAN1P53805 252 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 ERVPABLB-1P60509 514 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 SLC7A9P82251 487 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 TBX2Q13207 712 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-209ENST00000589941 STK38Q15208 465 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 KRTAP19-4Q3LI73 84 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 ARL13BQ3SXY8 428 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 BTBD8Q5XKL5 378 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 TRIM65Q6PJ69 517 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 APBB1IPQ7Z5R6 666 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-209ENST00000589941 TMEM25Q86YD3 366 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 TMEM139Q8IV31 216 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 BBS7Q8IWZ6 715 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 C8orf76Q96K31 380 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 PKMYT1Q99640 499 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 SH3GLB2Q9NR46 395 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 GJB4Q9NTQ9 266 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 DNAJC17Q9NVM6 304 aaKnown RBP8.1□□□□□ -1.11
SMAD4-209ENST00000589941 ZNF446Q9NWS9 450 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 DEC1Q9P2X7 70 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 UXTQ9UBK9 157 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-209ENST00000589941 UBQLN1Q9UMX0 589 aaKnown RBP8.1□□□□□ -1.11
SMAD4-209ENST00000589941 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMAD4-209ENST00000589941 CLIC4Q9Y696 253 aa8.1□□□□□ -1.11
SMAD4-209ENST00000589941 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-209ENST00000589941 SH3D21A4FU49 640 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 LACTBL1A8MY62 500 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 K7ERI5 159 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 OPA1O60313 960 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 PFKFB1P16118 471 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 PTPN1P18031 435 aaKnown RBP8.09□□□□□ -1.11
SMAD4-209ENST00000589941 CYP11B2P19099 503 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 IGFALSP35858 605 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 NPTX2P47972 431 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 TPM4P67936 248 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 CCT2P78371 535 aaKnown RBP8.09□□□□□ -1.11
SMAD4-209ENST00000589941 GAD2Q05329 585 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 CLCA4Q14CN2 919 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 PPP2R5AQ15172 486 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 ANO4Q32M45 955 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 TM4SF20Q53R12 229 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 TMEM177Q53S58 311 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 C3orf38Q5JPI3 329 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 CT47A1Q5JQC4 288 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-209ENST00000589941 PHF19Q5T6S3 580 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 SFMBT2Q5VUG0 894 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 C9orf57Q5W0N0 161 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 RESP18Q5W5W9 173 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 CPZQ66K79 652 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 GRAMD4Q6IC98 578 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 ZCCHC8Q6NZY4 707 aaKnown RBP8.09□□□□□ -1.11
SMAD4-209ENST00000589941 KANSL1Q7Z3B3 1105 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 VSTM4Q8IW00 320 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 REXO1L1PQ8IX06 675 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 ADGRF2Q8IZF7 708 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 NLGN4XQ8N0W4 816 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 DAW1Q8N136 415 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 BIRC7Q96CA5 298 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 PYM1Q9BRP8 204 aaKnown RBP8.09□□□□□ -1.11
SMAD4-209ENST00000589941 TCHPQ9BT92 498 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 PCDH18Q9HCL0 1135 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 RIC8BQ9NVN3 520 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 IFNKQ9P0W0 207 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 ARHGAP28Q9P2N2 729 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 ORC3Q9UBD5 711 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-209ENST00000589941 DNAI1Q9UI46 699 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 SATB2Q9UPW6 733 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 PLAAQ9Y263 795 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 ATP23Q9Y6H3 246 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 STON1Q9Y6Q2 735 aa8.09□□□□□ -1.11
SMAD4-209ENST00000589941 A0A1B0GVL5 298 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 TLDC2A0PJX2 215 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 A1L4Q6 167 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 GOLGA6L9A6NEM1 432 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 CYB561D2O14569 222 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 FAM189A1O60320 539 aa8.08□□□□□ -1.12
SMAD4-209ENST00000589941 CUTAO60888 179 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms