RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 POLR3BQ9NW08 1133 aaPredicted RBP12.3□□□□□ -0.44
DNMT1-218ENST00000589294 GOLGA6AQ9NYA3 693 aa12.3□□□□□ -0.44
DNMT1-218ENST00000589294 DKK3Q9UBP4 350 aa12.3□□□□□ -0.44
DNMT1-218ENST00000589294 FAM153AQ9UHL3 310 aa12.3□□□□□ -0.44
DNMT1-218ENST00000589294 SARDHQ9UL12 918 aa12.3□□□□□ -0.44
DNMT1-218ENST00000589294 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.29□□□□□ -0.44
DNMT1-218ENST00000589294 TTC24A2A3L6 582 aaPredicted RBP12.29□□□□□ -0.44
DNMT1-218ENST00000589294 ERI2A8K979 691 aaKnown RBP12.29□□□□□ -0.44
DNMT1-218ENST00000589294 K7ESF4 209 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 TRAFD1O14545 582 aaPredicted RBP12.29□□□□□ -0.44
DNMT1-218ENST00000589294 HTRA2O43464 458 aaPredicted RBP12.29□□□□□ -0.44
DNMT1-218ENST00000589294 METTL18O95568 372 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 DNTTP04053 509 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 ZSCAN5DPP0CG00 497 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 ETS1P14921 441 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 GKP32189 559 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 SUOXP51687 545 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 GEMP55040 296 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 RPL26P61254 145 aaKnown RBP12.29□□□□□ -0.44
DNMT1-218ENST00000589294 MPP3Q13368 585 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 IHHQ14623 411 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 PPP1R7Q15435 360 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 TMEM31Q5JXX7 168 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 BRAT1Q6PJG6 821 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 USP30Q70CQ3 517 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 CAMK1DQ8IU85 385 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 KLHDC8BQ8IXV7 354 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 MMGT1Q8N4V1 131 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 SPATA22Q8NHS9 363 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 HMGB4Q8WW32 186 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 LRRC45Q96CN5 670 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 ECHDC3Q96DC8 303 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 NSMCE3Q96MG7 304 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 RBM15Q96T37 977 aaKnown RBP eCLIP12.29□□□□□ -0.44
DNMT1-218ENST00000589294 DYRK4Q9NR20 520 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 PRMT8Q9NR22 394 aaPredicted RBP12.29□□□□□ -0.44
DNMT1-218ENST00000589294 FBXO4Q9UKT5 387 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 RPL26L1Q9UNX3 145 aaKnown RBP12.29□□□□□ -0.44
DNMT1-218ENST00000589294 NCKAP1Q9Y2A7 1128 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 PCDHGC4Q9Y5F7 938 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 RAI2Q9Y5P3 530 aa12.29□□□□□ -0.44
DNMT1-218ENST00000589294 CKAP5Q14008 2032 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 LOC285095A0A1B0GVY8 99 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 TSPAN11A1L157 253 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 FAM187AA6NFU0 413 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 C16orf96A6NNT2 1141 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 KPNA3O00505 521 aaPredicted RBP12.28□□□□□ -0.44
DNMT1-218ENST00000589294 FZD6O60353 706 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 ZNF217O75362 1048 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 GJB3O75712 270 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 MT-CYBP00156 380 aaPredicted RBP12.28□□□□□ -0.44
DNMT1-218ENST00000589294 UGT2B4P06133 528 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 ACADMP11310 421 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 NDUFV2P19404 249 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 ITGB7P26010 798 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 PSMB4P28070 264 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 CDK18Q07002 472 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 PTK6Q13882 451 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 TTC31Q49AM3 519 aaPredicted RBP12.28□□□□□ -0.44
DNMT1-218ENST00000589294 ARMC12Q5T9G4 340 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 CCDC70Q6NSX1 233 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 KBTBD6Q86V97 674 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 NDUFAF2Q8N183 169 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 PGBD3Q8N328 593 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.28□□□□□ -0.44
DNMT1-218ENST00000589294 GLIS1Q8NBF1 620 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 GRIN3AQ8TCU5 1115 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 RAB7BQ96AH8 199 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 OXNAD1Q96HP4 312 aaPredicted RBP12.28□□□□□ -0.44
DNMT1-218ENST00000589294 KLHL32Q96NJ5 620 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 HHIPQ96QV1 700 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 ADGRE3Q9BY15 652 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 FAM126AQ9BYI3 521 aaPredicted RBP12.28□□□□□ -0.44
DNMT1-218ENST00000589294 PABPC3Q9H361 631 aaKnown RBP12.28□□□□□ -0.44
DNMT1-218ENST00000589294 ETNK1Q9HBU6 452 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 RAB6BQ9NRW1 208 aa12.28□□□□□ -0.44
DNMT1-218ENST00000589294 BCCIPQ9P287 314 aaKnown RBP eCLIP12.28□□□□□ -0.44
DNMT1-218ENST00000589294 FAM86C2PA6NEL3 165 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 MID1O15344 667 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 SLC7A4O43246 635 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 PMPCBO75439 489 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 PGLSO95336 258 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 PIGNO95427 931 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 IGLV3-19P01714 112 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 TIMP2P16035 220 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 NFKBIAP25963 317 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 OXTRP30559 389 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 ADCY8P40145 1251 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 TNNT3P45378 269 aaPredicted RBP12.27□□□□□ -0.45
DNMT1-218ENST00000589294 PSMD8P48556 350 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 WNT3AP56704 352 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 TUBB4BP68371 445 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 CDK16Q00536 496 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 C2orf54Q08AI8 447 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 TRAF2Q12933 501 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 GPS1Q13098 491 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 SEMA5AQ13591 1074 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 ZNF528Q3MIS6 628 aa12.27□□□□□ -0.45
DNMT1-218ENST00000589294 GLE1Q53GS7 698 aaKnown RBP12.27□□□□□ -0.45
DNMT1-218ENST00000589294 FAM182AQ5T1J6 154 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms