RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 EFR3AQ14156 821 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 KCNAB1Q14722 419 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 CLLU1OSQ5K130 101 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 FAXCQ5TGI0 409 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 MRNIPQ6NTE8 343 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 SHC4Q6S5L8 630 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 C1orf186Q6ZWK4 172 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 CATSPER4Q7RTX7 472 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 DGLUCYQ7Z3D6 616 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 GPBP1Q86WP2 473 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 KBTBD2Q8IY47 623 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 DAW1Q8N136 415 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 PDILTQ8N807 584 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 SCAMP5Q8TAC9 235 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 KCNG4Q8TDN1 519 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 RSPH1Q8WYR4 309 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 RAD54LQ92698 747 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 RMDN1Q96DB5 314 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 SLC46A1Q96NT5 459 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 MOGAT1Q96PD6 335 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 DDX23Q9BUQ8 820 aaKnown RBP8.14□□□□□ -1.11
ATG4D-210ENST00000588972 KIFC3Q9BVG8 833 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 TLR10Q9BXR5 811 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 INO80BQ9C086 356 aaPredicted RBP8.14□□□□□ -1.11
ATG4D-210ENST00000588972 CCSER1Q9C0I3 900 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 TP63Q9H3D4 680 aaPredicted RBP8.14□□□□□ -1.11
ATG4D-210ENST00000588972 SFXN1Q9H9B4 322 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 PRDM8Q9NQV8 689 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 RASSF1Q9NS23 344 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 ETAA1Q9NY74 926 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 CA14Q9ULX7 337 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 PCDHA7Q9UN72 937 aa8.14□□□□□ -1.11
ATG4D-210ENST00000588972 PIN4Q9Y237 131 aaKnown RBP8.14□□□□□ -1.11
ATG4D-210ENST00000588972 CFAP47Q6ZTR5 3102 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 SCO2A0A1W2PP80 73 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 MED19A0JLT2 244 aaPredicted RBP8.13□□□□□ -1.11
ATG4D-210ENST00000588972 PRSS47A8MTI9 375 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 INO80B-WBP1J3KQ70 363 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 FFAR3O14843 346 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 PCDH17O14917 1159 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 ASAP2O43150 1006 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 B4GALT5O43286 388 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 RRP9O43818 475 aaKnown RBP8.13□□□□□ -1.11
ATG4D-210ENST00000588972 TSPAN1O60635 241 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 EPCAMP16422 314 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 MST1P26927 711 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 ALDH7A1P49419 539 aaKnown RBP8.13□□□□□ -1.11
ATG4D-210ENST00000588972 PTENP60484 403 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 NSUN2Q08J23 767 aaKnown RBP eCLIP8.13□□□□□ -1.11
ATG4D-210ENST00000588972 MAPK7Q13164 816 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 GIT2Q14161 759 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 TFDP1Q14186 410 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 MXD4Q14582 209 aaPredicted RBP8.13□□□□□ -1.11
ATG4D-210ENST00000588972 IQCB1Q15051 598 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 NOMO2Q5JPE7 1267 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 ATL3Q6DD88 541 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 FAM111BQ6SJ93 734 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 KCTD20Q7Z5Y7 419 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 CDR2LQ86X02 465 aaPredicted RBP8.13□□□□□ -1.11
ATG4D-210ENST00000588972 ECHDC2Q86YB7 292 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 SLC44A2Q8IWA5 706 aaPredicted RBP8.13□□□□□ -1.11
ATG4D-210ENST00000588972 CCDC117Q8IWD4 279 aaPredicted RBP8.13□□□□□ -1.11
ATG4D-210ENST00000588972 GPR135Q8IZ08 494 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 C12orf76Q8N812 135 aaPredicted RBP8.13□□□□□ -1.11
ATG4D-210ENST00000588972 SYT2Q8N9I0 419 aaPredicted RBP8.13□□□□□ -1.11
ATG4D-210ENST00000588972 THAP4Q8WY91 577 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 LARP4BQ92615 738 aaKnown RBP8.13□□□□□ -1.11
ATG4D-210ENST00000588972 CPB2Q96IY4 423 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 MAELQ96JY0 434 aaKnown RBP8.13□□□□□ -1.11
ATG4D-210ENST00000588972 REEP2Q9BRK0 252 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 TTYH3Q9C0H2 523 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 ZBP1Q9H171 429 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 ZBTB26Q9HCK0 441 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 SLC13A4Q9UKG4 626 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 RCOR1Q9UKL0 485 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 CFAP45Q9UL16 551 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 C2orf16Q68DN1 1984 aa8.13□□□□□ -1.11
ATG4D-210ENST00000588972 A0A0U1RQF3 1178 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 AQP7P3A6NL99 342 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 CCDC169A6NNP5 214 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 PRR5-ARHGAP8B1AHC4 643 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 HOXC11O43248 304 aaPredicted RBP8.12□□□□□ -1.11
ATG4D-210ENST00000588972 PI15O43692 258 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 TRIM13O60858 407 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 ZC3H11AO75152 810 aaKnown RBP eCLIP8.12□□□□□ -1.11
ATG4D-210ENST00000588972 RNASEH2AO75792 299 aaKnown RBP8.12□□□□□ -1.11
ATG4D-210ENST00000588972 SOAT2O75908 522 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 ERLIN2O94905 339 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 CTSAP10619 480 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 STAT6P42226 847 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 NPTX2P47972 431 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 PAPOLAP51003 745 aaKnown RBP8.12□□□□□ -1.11
ATG4D-210ENST00000588972 PRKAA2P54646 552 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 PEX3P56589 373 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 AP2B1P63010 937 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 NUCB2P80303 420 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 CUL4BQ13620 913 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 PUM1Q14671 1186 aaKnown RBP eCLIP8.12□□□□□ -1.11
ATG4D-210ENST00000588972 ZNF750Q32MQ0 723 aa8.12□□□□□ -1.11
ATG4D-210ENST00000588972 FAAH2Q6GMR7 532 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms